Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-3Q3UHX8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-3Q3UHX8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Gm13168-201ENSMUST00000121771 632 ntBASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Gm8520-201ENSMUST00000186517 868 ntBASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-3Q3UHX8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Gm38285-201ENSMUST00000192928 922 ntBASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-3Q3UHX8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-3Q3UHX8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-3Q3UHX8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-3Q3UHX8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Gm22240-201ENSMUST00000175225 82 ntBASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Mtag2-201ENSMUST00000058665 714 ntBASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-3Q3UHX8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nkx6-3Q3UHX8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms