Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.33■□□□□ 0.69
Trim43aQ3TL54 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43aQ3TL54 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43aQ3TL54 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43aQ3TL54 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43aQ3TL54 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43aQ3TL54 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43aQ3TL54 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Trim43aQ3TL54 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Gm8495-201ENSMUST00000188740 694 ntBASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim43aQ3TL54 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Gm18284-201ENSMUST00000172604 624 ntBASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Gm26833-201ENSMUST00000180899 440 ntBASIC19.31■□□□□ 0.68
Trim43aQ3TL54 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Trim43aQ3TL54 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43aQ3TL54 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.29■□□□□ 0.68
Trim43aQ3TL54 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.28■□□□□ 0.68
Trim43aQ3TL54 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43aQ3TL54 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms