Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Gm12382-201ENSMUST00000122005 922 ntBASIC19.18■□□□□ 0.66
Gm11236J3QMS7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.18■□□□□ 0.66
Gm11236J3QMS7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm11236J3QMS7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Gm43799-201ENSMUST00000201845 579 ntBASIC19.17■□□□□ 0.66
Gm11236J3QMS7 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm11236J3QMS7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Timm23-208ENSMUST00000226683 750 ntBASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm11236J3QMS7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm11236J3QMS7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Gm11236J3QMS7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.14■□□□□ 0.65
Gm11236J3QMS7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Gm30025-201ENSMUST00000218555 728 ntBASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm11236J3QMS7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gm11236J3QMS7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm11236J3QMS7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.12■□□□□ 0.65
Gm11236J3QMS7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.12■□□□□ 0.65
Gm11236J3QMS7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm11236J3QMS7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Gm11236J3QMS7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.12■□□□□ 0.65
Gm11236J3QMS7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm11236J3QMS7 Mir2861-201ENSMUST00000175539 82 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms