Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rsph3bQ9DA80 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.04■□□□□ 0.8
Rsph3bQ9DA80 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Gm13158-201ENSMUST00000122007 736 ntBASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rsph3bQ9DA80 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rsph3bQ9DA80 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rsph3bQ9DA80 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rsph3bQ9DA80 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rsph3bQ9DA80 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rsph3bQ9DA80 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rsph3bQ9DA80 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20■□□□□ 0.79
Rsph3bQ9DA80 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rsph3bQ9DA80 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Gm11927-201ENSMUST00000118472 759 ntBASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Gm22325-201ENSMUST00000158904 308 ntBASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Mir6982-201ENSMUST00000184354 68 ntBASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rsph3bQ9DA80 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Gm15378-201ENSMUST00000121894 207 ntBASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Gm6576-201ENSMUST00000169678 883 ntBASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Gm10698-201ENSMUST00000182663 604 ntBASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph3bQ9DA80 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms