Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Smchd1Q6P5D8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smchd1Q6P5D8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.23■□□□□ 0.83
Smchd1Q6P5D8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smchd1Q6P5D8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smchd1Q6P5D8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smchd1Q6P5D8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Gm18025-201ENSMUST00000221733 862 ntBASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Smchd1Q6P5D8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Gm15378-201ENSMUST00000121894 207 ntBASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.21■□□□□ 0.83
Smchd1Q6P5D8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Smchd1Q6P5D8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.2■□□□□ 0.83
Smchd1Q6P5D8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.2■□□□□ 0.83
Smchd1Q6P5D8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.2■□□□□ 0.83
Smchd1Q6P5D8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Smchd1Q6P5D8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Smchd1Q6P5D8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smchd1Q6P5D8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Flg-201ENSMUST00000050758 1488 ntBASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smchd1Q6P5D8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.18■□□□□ 0.82
Smchd1Q6P5D8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Mir5122-201ENSMUST00000175004 89 ntBASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smchd1Q6P5D8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smchd1Q6P5D8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Mir6982-201ENSMUST00000184354 68 ntBASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smchd1Q6P5D8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms