Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-3Q3UHX8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-3Q3UHX8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-3Q3UHX8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx6-3Q3UHX8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx6-3Q3UHX8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx6-3Q3UHX8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx6-3Q3UHX8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx6-3Q3UHX8 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Gm11249-201ENSMUST00000117071 859 ntBASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nkx6-3Q3UHX8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Flg-201ENSMUST00000050758 1488 ntBASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx6-3Q3UHX8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-3Q3UHX8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Gm11927-201ENSMUST00000118472 759 ntBASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-3Q3UHX8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-3Q3UHX8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Zfp783-201ENSMUST00000095946 670 ntBASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-3Q3UHX8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-3Q3UHX8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx6-3Q3UHX8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-3Q3UHX8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-3Q3UHX8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms