Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43aQ3TL54 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Gm43173-201ENSMUST00000202246 593 ntBASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trim43aQ3TL54 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim43aQ3TL54 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim43aQ3TL54 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Gm43017-201ENSMUST00000198296 752 ntBASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.39■□□□□ 0.69
Trim43aQ3TL54 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43aQ3TL54 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43aQ3TL54 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43aQ3TL54 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim43aQ3TL54 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43aQ3TL54 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43aQ3TL54 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43aQ3TL54 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43aQ3TL54 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43aQ3TL54 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43aQ3TL54 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim43aQ3TL54 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms