Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.34■□□□□ 0.37
Brf2Q3UAW9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brf2Q3UAW9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brf2Q3UAW9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Brf2Q3UAW9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brf2Q3UAW9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Brf2Q3UAW9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Brf2Q3UAW9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Brf2Q3UAW9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Brf2Q3UAW9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Brf2Q3UAW9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Brf2Q3UAW9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brf2Q3UAW9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms