Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vamp8O70404 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vamp8O70404 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.01□□□□□ -0.33
Vamp8O70404 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp8O70404 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vamp8O70404 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp8O70404 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vamp8O70404 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.99□□□□□ -0.33
Vamp8O70404 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.99□□□□□ -0.33
Vamp8O70404 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp8O70404 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vamp8O70404 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
Vamp8O70404 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.98□□□□□ -0.33
Vamp8O70404 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vamp8O70404 Gm8969-201ENSMUST00000199694 526 ntBASIC12.98□□□□□ -0.33
Vamp8O70404 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vamp8O70404 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.98□□□□□ -0.33
Vamp8O70404 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.98□□□□□ -0.33
Vamp8O70404 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vamp8O70404 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vamp8O70404 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vamp8O70404 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Vamp8O70404 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.97□□□□□ -0.33
Vamp8O70404 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vamp8O70404 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp8O70404 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp8O70404 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp8O70404 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp8O70404 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp8O70404 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp8O70404 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vamp8O70404 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms