Protein–RNA interactions for Protein: Q9JJI8

Rpl38, 60S ribosomal protein L38, mousemouse

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl38Q9JJI8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rpl38Q9JJI8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rpl38Q9JJI8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpl38Q9JJI8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rpl38Q9JJI8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rpl38Q9JJI8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rpl38Q9JJI8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.79■■□□□ 1.4
Rpl38Q9JJI8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpl38Q9JJI8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Rpl38Q9JJI8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpl38Q9JJI8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpl38Q9JJI8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rpl38Q9JJI8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Rpl38Q9JJI8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpl38Q9JJI8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rpl38Q9JJI8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rpl38Q9JJI8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rpl38Q9JJI8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rpl38Q9JJI8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.74■■□□□ 1.39
Rpl38Q9JJI8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rpl38Q9JJI8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.74■■□□□ 1.39
Rpl38Q9JJI8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpl38Q9JJI8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rpl38Q9JJI8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpl38Q9JJI8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.71■■□□□ 1.39
Rpl38Q9JJI8 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.71■■□□□ 1.39
Rpl38Q9JJI8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rpl38Q9JJI8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpl38Q9JJI8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rpl38Q9JJI8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpl38Q9JJI8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Rpl38Q9JJI8 Gm16148-201ENSMUST00000119653 893 ntBASIC23.66■■□□□ 1.38
Rpl38Q9JJI8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Rpl38Q9JJI8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpl38Q9JJI8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Rpl38Q9JJI8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.64■■□□□ 1.37
Rpl38Q9JJI8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpl38Q9JJI8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpl38Q9JJI8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpl38Q9JJI8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpl38Q9JJI8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.63■■□□□ 1.37
Rpl38Q9JJI8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpl38Q9JJI8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpl38Q9JJI8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rpl38Q9JJI8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rpl38Q9JJI8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpl38Q9JJI8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rpl38Q9JJI8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpl38Q9JJI8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpl38Q9JJI8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpl38Q9JJI8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpl38Q9JJI8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpl38Q9JJI8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpl38Q9JJI8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.58■■□□□ 1.37
Rpl38Q9JJI8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Rpl38Q9JJI8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.58■■□□□ 1.37
Rpl38Q9JJI8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Rpl38Q9JJI8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rpl38Q9JJI8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpl38Q9JJI8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpl38Q9JJI8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rpl38Q9JJI8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Rpl38Q9JJI8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpl38Q9JJI8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rpl38Q9JJI8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpl38Q9JJI8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpl38Q9JJI8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rpl38Q9JJI8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rpl38Q9JJI8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpl38Q9JJI8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpl38Q9JJI8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpl38Q9JJI8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.51■■□□□ 1.35
Rpl38Q9JJI8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpl38Q9JJI8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpl38Q9JJI8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Rpl38Q9JJI8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpl38Q9JJI8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpl38Q9JJI8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rpl38Q9JJI8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpl38Q9JJI8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rpl38Q9JJI8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Rpl38Q9JJI8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rpl38Q9JJI8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rpl38Q9JJI8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.44■■□□□ 1.34
Rpl38Q9JJI8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rpl38Q9JJI8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rpl38Q9JJI8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rpl38Q9JJI8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rpl38Q9JJI8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rpl38Q9JJI8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rpl38Q9JJI8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rpl38Q9JJI8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rpl38Q9JJI8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rpl38Q9JJI8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Rpl38Q9JJI8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rpl38Q9JJI8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rpl38Q9JJI8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rpl38Q9JJI8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rpl38Q9JJI8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Rpl38Q9JJI8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms