Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl28Q9JIL2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl28Q9JIL2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ccl28Q9JIL2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl28Q9JIL2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl28Q9JIL2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.85■□□□□ 0.77
Ccl28Q9JIL2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl28Q9JIL2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl28Q9JIL2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl28Q9JIL2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl28Q9JIL2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccl28Q9JIL2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccl28Q9JIL2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl28Q9JIL2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl28Q9JIL2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccl28Q9JIL2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.81■□□□□ 0.76
Ccl28Q9JIL2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Ccl28Q9JIL2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl28Q9JIL2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl28Q9JIL2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ccl28Q9JIL2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl28Q9JIL2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.8■□□□□ 0.76
Ccl28Q9JIL2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl28Q9JIL2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccl28Q9JIL2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl28Q9JIL2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl28Q9JIL2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccl28Q9JIL2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl28Q9JIL2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl28Q9JIL2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl28Q9JIL2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl28Q9JIL2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl28Q9JIL2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.75■□□□□ 0.75
Ccl28Q9JIL2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccl28Q9JIL2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccl28Q9JIL2 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.74■□□□□ 0.75
Ccl28Q9JIL2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl28Q9JIL2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl28Q9JIL2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl28Q9JIL2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccl28Q9JIL2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccl28Q9JIL2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl28Q9JIL2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccl28Q9JIL2 Gm16148-201ENSMUST00000119653 893 ntBASIC19.7■□□□□ 0.74
Ccl28Q9JIL2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccl28Q9JIL2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl28Q9JIL2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl28Q9JIL2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl28Q9JIL2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccl28Q9JIL2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Ccl28Q9JIL2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccl28Q9JIL2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccl28Q9JIL2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl28Q9JIL2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccl28Q9JIL2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl28Q9JIL2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccl28Q9JIL2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl28Q9JIL2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl28Q9JIL2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccl28Q9JIL2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccl28Q9JIL2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccl28Q9JIL2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccl28Q9JIL2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl28Q9JIL2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl28Q9JIL2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl28Q9JIL2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl28Q9JIL2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccl28Q9JIL2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccl28Q9JIL2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccl28Q9JIL2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccl28Q9JIL2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ccl28Q9JIL2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl28Q9JIL2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl28Q9JIL2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl28Q9JIL2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.62■□□□□ 0.73
Ccl28Q9JIL2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl28Q9JIL2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl28Q9JIL2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl28Q9JIL2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl28Q9JIL2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl28Q9JIL2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl28Q9JIL2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl28Q9JIL2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccl28Q9JIL2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccl28Q9JIL2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl28Q9JIL2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl28Q9JIL2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl28Q9JIL2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccl28Q9JIL2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccl28Q9JIL2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl28Q9JIL2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl28Q9JIL2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl28Q9JIL2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl28Q9JIL2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl28Q9JIL2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl28Q9JIL2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ccl28Q9JIL2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccl28Q9JIL2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccl28Q9JIL2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl28Q9JIL2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms