Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhga3Q91XY5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga3Q91XY5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga3Q91XY5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga3Q91XY5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga3Q91XY5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga3Q91XY5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga3Q91XY5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga3Q91XY5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdhga3Q91XY5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga3Q91XY5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga3Q91XY5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga3Q91XY5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga3Q91XY5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga3Q91XY5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pcdhga3Q91XY5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga3Q91XY5 Zfp131-205ENSMUST00000223812 663 ntBASIC21.67■■□□□ 1.06
Pcdhga3Q91XY5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga3Q91XY5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga3Q91XY5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhga3Q91XY5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga3Q91XY5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga3Q91XY5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhga3Q91XY5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga3Q91XY5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga3Q91XY5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga3Q91XY5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga3Q91XY5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhga3Q91XY5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga3Q91XY5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.61■■□□□ 1.05
Pcdhga3Q91XY5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhga3Q91XY5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhga3Q91XY5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga3Q91XY5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhga3Q91XY5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga3Q91XY5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhga3Q91XY5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga3Q91XY5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga3Q91XY5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga3Q91XY5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga3Q91XY5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga3Q91XY5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga3Q91XY5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhga3Q91XY5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 Amer2-203ENSMUST00000225247 2662 ntBASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga3Q91XY5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.46■■□□□ 1.03
Pcdhga3Q91XY5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhga3Q91XY5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga3Q91XY5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga3Q91XY5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhga3Q91XY5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga3Q91XY5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga3Q91XY5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga3Q91XY5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhga3Q91XY5 Gm9397-201ENSMUST00000200125 605 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms