Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhga4Q91XY4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhga4Q91XY4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhga4Q91XY4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.07■■□□□ 1.44
Pcdhga4Q91XY4 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.07■■□□□ 1.44
Pcdhga4Q91XY4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
Pcdhga4Q91XY4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Pcdhga4Q91XY4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga4Q91XY4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga4Q91XY4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga4Q91XY4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga4Q91XY4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga4Q91XY4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga4Q91XY4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga4Q91XY4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Pcdhga4Q91XY4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Pcdhga4Q91XY4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga4Q91XY4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga4Q91XY4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga4Q91XY4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhga4Q91XY4 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.01■■□□□ 1.43
Pcdhga4Q91XY4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhga4Q91XY4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhga4Q91XY4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga4Q91XY4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga4Q91XY4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhga4Q91XY4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Pcdhga4Q91XY4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga4Q91XY4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhga4Q91XY4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhga4Q91XY4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.94■■□□□ 1.42
Pcdhga4Q91XY4 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.94■■□□□ 1.42
Pcdhga4Q91XY4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga4Q91XY4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga4Q91XY4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhga4Q91XY4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.92■■□□□ 1.42
Pcdhga4Q91XY4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Pcdhga4Q91XY4 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.91■■□□□ 1.42
Pcdhga4Q91XY4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga4Q91XY4 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.9■■□□□ 1.42
Pcdhga4Q91XY4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga4Q91XY4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.9■■□□□ 1.42
Pcdhga4Q91XY4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdhga4Q91XY4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Pcdhga4Q91XY4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga4Q91XY4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga4Q91XY4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga4Q91XY4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga4Q91XY4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga4Q91XY4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga4Q91XY4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga4Q91XY4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Pcdhga4Q91XY4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.84■■□□□ 1.41
Pcdhga4Q91XY4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhga4Q91XY4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhga4Q91XY4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhga4Q91XY4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhga4Q91XY4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.82■■□□□ 1.4
Pcdhga4Q91XY4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhga4Q91XY4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga4Q91XY4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga4Q91XY4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga4Q91XY4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga4Q91XY4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga4Q91XY4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhga4Q91XY4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhga4Q91XY4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhga4Q91XY4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhga4Q91XY4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhga4Q91XY4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhga4Q91XY4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhga4Q91XY4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhga4Q91XY4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhga4Q91XY4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhga4Q91XY4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhga4Q91XY4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhga4Q91XY4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhga4Q91XY4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.76■■□□□ 1.39
Pcdhga4Q91XY4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcdhga4Q91XY4 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.75■■□□□ 1.39
Pcdhga4Q91XY4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.74■■□□□ 1.39
Pcdhga4Q91XY4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhga4Q91XY4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhga4Q91XY4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.72■■□□□ 1.39
Pcdhga4Q91XY4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pcdhga4Q91XY4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Pcdhga4Q91XY4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga4Q91XY4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga4Q91XY4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhga4Q91XY4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhga4Q91XY4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhga4Q91XY4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhga4Q91XY4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdhga4Q91XY4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga4Q91XY4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga4Q91XY4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga4Q91XY4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga4Q91XY4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga4Q91XY4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhga4Q91XY4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms