Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.24■□□□□ 0.99
Rcc1Q8VE37 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rcc1Q8VE37 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rcc1Q8VE37 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rcc1Q8VE37 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rcc1Q8VE37 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rcc1Q8VE37 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rcc1Q8VE37 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rcc1Q8VE37 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rcc1Q8VE37 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.21■□□□□ 0.99
Rcc1Q8VE37 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rcc1Q8VE37 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.2■□□□□ 0.98
Rcc1Q8VE37 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rcc1Q8VE37 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rcc1Q8VE37 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rcc1Q8VE37 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rcc1Q8VE37 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.17■□□□□ 0.98
Rcc1Q8VE37 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rcc1Q8VE37 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rcc1Q8VE37 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.15■□□□□ 0.98
Rcc1Q8VE37 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rcc1Q8VE37 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rcc1Q8VE37 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rcc1Q8VE37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rcc1Q8VE37 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcc1Q8VE37 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Rcc1Q8VE37 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rcc1Q8VE37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.11■□□□□ 0.97
Rcc1Q8VE37 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rcc1Q8VE37 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcc1Q8VE37 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcc1Q8VE37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rcc1Q8VE37 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcc1Q8VE37 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rcc1Q8VE37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rcc1Q8VE37 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.09■□□□□ 0.97
Rcc1Q8VE37 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rcc1Q8VE37 Gm16148-201ENSMUST00000119653 893 ntBASIC21.08■□□□□ 0.97
Rcc1Q8VE37 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rcc1Q8VE37 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rcc1Q8VE37 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rcc1Q8VE37 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rcc1Q8VE37 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcc1Q8VE37 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcc1Q8VE37 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rcc1Q8VE37 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rcc1Q8VE37 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rcc1Q8VE37 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rcc1Q8VE37 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.04■□□□□ 0.96
Rcc1Q8VE37 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.03■□□□□ 0.96
Rcc1Q8VE37 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rcc1Q8VE37 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Rcc1Q8VE37 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rcc1Q8VE37 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.01■□□□□ 0.95
Rcc1Q8VE37 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rcc1Q8VE37 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rcc1Q8VE37 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rcc1Q8VE37 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rcc1Q8VE37 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21■□□□□ 0.95
Rcc1Q8VE37 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rcc1Q8VE37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rcc1Q8VE37 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.99■□□□□ 0.95
Rcc1Q8VE37 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rcc1Q8VE37 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.98■□□□□ 0.95
Rcc1Q8VE37 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rcc1Q8VE37 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rcc1Q8VE37 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rcc1Q8VE37 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rcc1Q8VE37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rcc1Q8VE37 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rcc1Q8VE37 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Rcc1Q8VE37 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rcc1Q8VE37 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rcc1Q8VE37 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rcc1Q8VE37 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rcc1Q8VE37 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rcc1Q8VE37 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rcc1Q8VE37 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rcc1Q8VE37 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rcc1Q8VE37 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rcc1Q8VE37 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rcc1Q8VE37 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rcc1Q8VE37 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rcc1Q8VE37 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rcc1Q8VE37 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rcc1Q8VE37 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rcc1Q8VE37 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rcc1Q8VE37 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rcc1Q8VE37 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.89■□□□□ 0.93
Rcc1Q8VE37 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rcc1Q8VE37 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rcc1Q8VE37 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rcc1Q8VE37 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rcc1Q8VE37 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rcc1Q8VE37 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rcc1Q8VE37 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rcc1Q8VE37 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rcc1Q8VE37 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rcc1Q8VE37 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rcc1Q8VE37 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms