Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Lsm1Q8VC85 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Lsm1Q8VC85 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.84■■□□□ 1.41
Lsm1Q8VC85 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lsm1Q8VC85 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.83■■□□□ 1.41
Lsm1Q8VC85 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lsm1Q8VC85 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lsm1Q8VC85 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Lsm1Q8VC85 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lsm1Q8VC85 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lsm1Q8VC85 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lsm1Q8VC85 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Lsm1Q8VC85 Gm24804-201ENSMUST00000174982 85 ntBASIC23.81■■□□□ 1.4
Lsm1Q8VC85 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Lsm1Q8VC85 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.8■■□□□ 1.4
Lsm1Q8VC85 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.8■■□□□ 1.4
Lsm1Q8VC85 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Lsm1Q8VC85 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.77■■□□□ 1.4
Lsm1Q8VC85 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lsm1Q8VC85 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Lsm1Q8VC85 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lsm1Q8VC85 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lsm1Q8VC85 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Lsm1Q8VC85 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Lsm1Q8VC85 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
Lsm1Q8VC85 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lsm1Q8VC85 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Lsm1Q8VC85 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Lsm1Q8VC85 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lsm1Q8VC85 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lsm1Q8VC85 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Lsm1Q8VC85 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.7■■□□□ 1.38
Lsm1Q8VC85 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lsm1Q8VC85 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Lsm1Q8VC85 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Lsm1Q8VC85 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lsm1Q8VC85 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.68■■□□□ 1.38
Lsm1Q8VC85 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Lsm1Q8VC85 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lsm1Q8VC85 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lsm1Q8VC85 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Lsm1Q8VC85 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Lsm1Q8VC85 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Lsm1Q8VC85 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lsm1Q8VC85 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.63■■□□□ 1.37
Lsm1Q8VC85 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lsm1Q8VC85 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lsm1Q8VC85 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Lsm1Q8VC85 Gm16148-201ENSMUST00000119653 893 ntBASIC23.62■■□□□ 1.37
Lsm1Q8VC85 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lsm1Q8VC85 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Lsm1Q8VC85 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lsm1Q8VC85 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Lsm1Q8VC85 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Lsm1Q8VC85 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lsm1Q8VC85 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Lsm1Q8VC85 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm1Q8VC85 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm1Q8VC85 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm1Q8VC85 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm1Q8VC85 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm1Q8VC85 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Lsm1Q8VC85 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.57■■□□□ 1.36
Lsm1Q8VC85 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Lsm1Q8VC85 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Lsm1Q8VC85 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lsm1Q8VC85 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lsm1Q8VC85 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lsm1Q8VC85 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Lsm1Q8VC85 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Lsm1Q8VC85 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lsm1Q8VC85 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.5■■□□□ 1.35
Lsm1Q8VC85 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lsm1Q8VC85 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lsm1Q8VC85 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lsm1Q8VC85 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lsm1Q8VC85 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lsm1Q8VC85 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Lsm1Q8VC85 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lsm1Q8VC85 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lsm1Q8VC85 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Lsm1Q8VC85 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsm1Q8VC85 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Lsm1Q8VC85 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lsm1Q8VC85 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lsm1Q8VC85 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Lsm1Q8VC85 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lsm1Q8VC85 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lsm1Q8VC85 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsm1Q8VC85 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsm1Q8VC85 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Lsm1Q8VC85 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lsm1Q8VC85 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lsm1Q8VC85 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
Lsm1Q8VC85 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lsm1Q8VC85 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Lsm1Q8VC85 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Lsm1Q8VC85 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Lsm1Q8VC85 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lsm1Q8VC85 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms