Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Pdlim2Q8R1G6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
Pdlim2Q8R1G6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pdlim2Q8R1G6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pdlim2Q8R1G6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pdlim2Q8R1G6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pdlim2Q8R1G6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pdlim2Q8R1G6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Pdlim2Q8R1G6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pdlim2Q8R1G6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pdlim2Q8R1G6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pdlim2Q8R1G6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pdlim2Q8R1G6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Pdlim2Q8R1G6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
Pdlim2Q8R1G6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Pdlim2Q8R1G6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.89■■■□□ 2.22
Pdlim2Q8R1G6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Pdlim2Q8R1G6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Pdlim2Q8R1G6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Pdlim2Q8R1G6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Pdlim2Q8R1G6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pdlim2Q8R1G6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pdlim2Q8R1G6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pdlim2Q8R1G6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.87■■■□□ 2.21
Pdlim2Q8R1G6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Pdlim2Q8R1G6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Pdlim2Q8R1G6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Pdlim2Q8R1G6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pdlim2Q8R1G6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pdlim2Q8R1G6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pdlim2Q8R1G6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.82■■■□□ 2.2
Pdlim2Q8R1G6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Pdlim2Q8R1G6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pdlim2Q8R1G6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Pdlim2Q8R1G6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.8■■■□□ 2.2
Pdlim2Q8R1G6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pdlim2Q8R1G6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pdlim2Q8R1G6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pdlim2Q8R1G6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pdlim2Q8R1G6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pdlim2Q8R1G6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pdlim2Q8R1G6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
Pdlim2Q8R1G6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pdlim2Q8R1G6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pdlim2Q8R1G6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pdlim2Q8R1G6 Gm25238-201ENSMUST00000174914 89 ntBASIC28.74■■■□□ 2.19
Pdlim2Q8R1G6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.73■■■□□ 2.19
Pdlim2Q8R1G6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pdlim2Q8R1G6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pdlim2Q8R1G6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pdlim2Q8R1G6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pdlim2Q8R1G6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pdlim2Q8R1G6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pdlim2Q8R1G6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pdlim2Q8R1G6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pdlim2Q8R1G6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pdlim2Q8R1G6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pdlim2Q8R1G6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pdlim2Q8R1G6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Pdlim2Q8R1G6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Pdlim2Q8R1G6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pdlim2Q8R1G6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pdlim2Q8R1G6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pdlim2Q8R1G6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pdlim2Q8R1G6 Gm17641-201ENSMUST00000166328 2350 ntBASIC28.67■■■□□ 2.18
Pdlim2Q8R1G6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Pdlim2Q8R1G6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pdlim2Q8R1G6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pdlim2Q8R1G6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pdlim2Q8R1G6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Pdlim2Q8R1G6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pdlim2Q8R1G6 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.64■■■□□ 2.18
Pdlim2Q8R1G6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Pdlim2Q8R1G6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pdlim2Q8R1G6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pdlim2Q8R1G6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pdlim2Q8R1G6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Pdlim2Q8R1G6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.6■■■□□ 2.17
Pdlim2Q8R1G6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Pdlim2Q8R1G6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pdlim2Q8R1G6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Pdlim2Q8R1G6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.58■■■□□ 2.17
Pdlim2Q8R1G6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.57■■■□□ 2.16
Pdlim2Q8R1G6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Pdlim2Q8R1G6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pdlim2Q8R1G6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.55■■■□□ 2.16
Pdlim2Q8R1G6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC28.53■■■□□ 2.16
Pdlim2Q8R1G6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pdlim2Q8R1G6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC28.52■■■□□ 2.16
Pdlim2Q8R1G6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Pdlim2Q8R1G6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.52■■■□□ 2.16
Pdlim2Q8R1G6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Pdlim2Q8R1G6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC28.51■■■□□ 2.16
Pdlim2Q8R1G6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pdlim2Q8R1G6 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.51■■■□□ 2.15
Pdlim2Q8R1G6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
Pdlim2Q8R1G6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pdlim2Q8R1G6 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.5■■■□□ 2.15
Pdlim2Q8R1G6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Pdlim2Q8R1G6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms