Protein–RNA interactions for Protein: Q8C940

A730049H05Rik, RIKEN cDNA A730049H05 gene, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730049H05RikQ8C940 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.42■■□□□ 1.18
A730049H05RikQ8C940 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.42■■□□□ 1.18
A730049H05RikQ8C940 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
A730049H05RikQ8C940 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
A730049H05RikQ8C940 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
A730049H05RikQ8C940 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.4■■□□□ 1.18
A730049H05RikQ8C940 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
A730049H05RikQ8C940 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
A730049H05RikQ8C940 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.39■■□□□ 1.18
A730049H05RikQ8C940 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
A730049H05RikQ8C940 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
A730049H05RikQ8C940 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 Gm24804-201ENSMUST00000174982 85 ntBASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A730049H05RikQ8C940 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A730049H05RikQ8C940 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A730049H05RikQ8C940 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A730049H05RikQ8C940 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
A730049H05RikQ8C940 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.3■■□□□ 1.16
A730049H05RikQ8C940 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
A730049H05RikQ8C940 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
A730049H05RikQ8C940 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
A730049H05RikQ8C940 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
A730049H05RikQ8C940 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
A730049H05RikQ8C940 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
A730049H05RikQ8C940 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
A730049H05RikQ8C940 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.25■■□□□ 1.15
A730049H05RikQ8C940 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
A730049H05RikQ8C940 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
A730049H05RikQ8C940 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Gm16148-201ENSMUST00000119653 893 ntBASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.2■■□□□ 1.14
A730049H05RikQ8C940 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A730049H05RikQ8C940 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A730049H05RikQ8C940 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A730049H05RikQ8C940 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A730049H05RikQ8C940 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
A730049H05RikQ8C940 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
A730049H05RikQ8C940 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
A730049H05RikQ8C940 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
A730049H05RikQ8C940 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
A730049H05RikQ8C940 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
A730049H05RikQ8C940 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
A730049H05RikQ8C940 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
A730049H05RikQ8C940 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
A730049H05RikQ8C940 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
A730049H05RikQ8C940 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
A730049H05RikQ8C940 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
A730049H05RikQ8C940 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
A730049H05RikQ8C940 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
A730049H05RikQ8C940 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
A730049H05RikQ8C940 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
A730049H05RikQ8C940 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
A730049H05RikQ8C940 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
A730049H05RikQ8C940 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms