Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smco3Q8BQM7 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.14■□□□□ 0.81
Smco3Q8BQM7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smco3Q8BQM7 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.14■□□□□ 0.81
Smco3Q8BQM7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.12■□□□□ 0.81
Smco3Q8BQM7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smco3Q8BQM7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Smco3Q8BQM7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.1■□□□□ 0.81
Smco3Q8BQM7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.1■□□□□ 0.81
Smco3Q8BQM7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smco3Q8BQM7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smco3Q8BQM7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smco3Q8BQM7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smco3Q8BQM7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smco3Q8BQM7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smco3Q8BQM7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smco3Q8BQM7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smco3Q8BQM7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smco3Q8BQM7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smco3Q8BQM7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smco3Q8BQM7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smco3Q8BQM7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smco3Q8BQM7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smco3Q8BQM7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smco3Q8BQM7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smco3Q8BQM7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Smco3Q8BQM7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Smco3Q8BQM7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smco3Q8BQM7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smco3Q8BQM7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smco3Q8BQM7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smco3Q8BQM7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smco3Q8BQM7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smco3Q8BQM7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smco3Q8BQM7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smco3Q8BQM7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smco3Q8BQM7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smco3Q8BQM7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.02■□□□□ 0.79
Smco3Q8BQM7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smco3Q8BQM7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smco3Q8BQM7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smco3Q8BQM7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smco3Q8BQM7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smco3Q8BQM7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smco3Q8BQM7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.99■□□□□ 0.79
Smco3Q8BQM7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Smco3Q8BQM7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smco3Q8BQM7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smco3Q8BQM7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smco3Q8BQM7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smco3Q8BQM7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smco3Q8BQM7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smco3Q8BQM7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smco3Q8BQM7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.96■□□□□ 0.79
Smco3Q8BQM7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smco3Q8BQM7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Smco3Q8BQM7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smco3Q8BQM7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smco3Q8BQM7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smco3Q8BQM7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smco3Q8BQM7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smco3Q8BQM7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smco3Q8BQM7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smco3Q8BQM7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smco3Q8BQM7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smco3Q8BQM7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smco3Q8BQM7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smco3Q8BQM7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Smco3Q8BQM7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smco3Q8BQM7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.92■□□□□ 0.78
Smco3Q8BQM7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Smco3Q8BQM7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smco3Q8BQM7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.91■□□□□ 0.78
Smco3Q8BQM7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.9■□□□□ 0.78
Smco3Q8BQM7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.9■□□□□ 0.78
Smco3Q8BQM7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
Smco3Q8BQM7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smco3Q8BQM7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smco3Q8BQM7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smco3Q8BQM7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.88■□□□□ 0.77
Smco3Q8BQM7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smco3Q8BQM7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smco3Q8BQM7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco3Q8BQM7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Smco3Q8BQM7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco3Q8BQM7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco3Q8BQM7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smco3Q8BQM7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smco3Q8BQM7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.86■□□□□ 0.77
Smco3Q8BQM7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smco3Q8BQM7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco3Q8BQM7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco3Q8BQM7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco3Q8BQM7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco3Q8BQM7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco3Q8BQM7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smco3Q8BQM7 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.84■□□□□ 0.77
Smco3Q8BQM7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Smco3Q8BQM7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco3Q8BQM7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms