Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Samm50Q8BGH2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Samm50Q8BGH2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.8■■■□□ 2.2
Samm50Q8BGH2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Samm50Q8BGH2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Samm50Q8BGH2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Samm50Q8BGH2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Samm50Q8BGH2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Samm50Q8BGH2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Samm50Q8BGH2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.77■■■□□ 2.2
Samm50Q8BGH2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Samm50Q8BGH2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.77■■■□□ 2.2
Samm50Q8BGH2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Samm50Q8BGH2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.76■■■□□ 2.19
Samm50Q8BGH2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Samm50Q8BGH2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.75■■■□□ 2.19
Samm50Q8BGH2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Samm50Q8BGH2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Samm50Q8BGH2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Samm50Q8BGH2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Samm50Q8BGH2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Samm50Q8BGH2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Samm50Q8BGH2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
Samm50Q8BGH2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Samm50Q8BGH2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.69■■■□□ 2.18
Samm50Q8BGH2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Samm50Q8BGH2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Samm50Q8BGH2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Samm50Q8BGH2 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.68■■■□□ 2.18
Samm50Q8BGH2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Samm50Q8BGH2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Samm50Q8BGH2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Samm50Q8BGH2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Samm50Q8BGH2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Samm50Q8BGH2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Samm50Q8BGH2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Samm50Q8BGH2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Samm50Q8BGH2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Samm50Q8BGH2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Samm50Q8BGH2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Samm50Q8BGH2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Samm50Q8BGH2 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.61■■■□□ 2.17
Samm50Q8BGH2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Samm50Q8BGH2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Samm50Q8BGH2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Samm50Q8BGH2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Samm50Q8BGH2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Samm50Q8BGH2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.58■■■□□ 2.17
Samm50Q8BGH2 Gm45855-201ENSMUST00000212546 880 ntBASIC28.58■■■□□ 2.17
Samm50Q8BGH2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Samm50Q8BGH2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Samm50Q8BGH2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Samm50Q8BGH2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Samm50Q8BGH2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Samm50Q8BGH2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Samm50Q8BGH2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Samm50Q8BGH2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Samm50Q8BGH2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Samm50Q8BGH2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Samm50Q8BGH2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Samm50Q8BGH2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Samm50Q8BGH2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Samm50Q8BGH2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Samm50Q8BGH2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Samm50Q8BGH2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Samm50Q8BGH2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Samm50Q8BGH2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.48■■■□□ 2.15
Samm50Q8BGH2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Samm50Q8BGH2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.48■■■□□ 2.15
Samm50Q8BGH2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Samm50Q8BGH2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Samm50Q8BGH2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.47■■■□□ 2.15
Samm50Q8BGH2 Gm9397-201ENSMUST00000200125 605 ntBASIC28.47■■■□□ 2.15
Samm50Q8BGH2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Samm50Q8BGH2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Samm50Q8BGH2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.46■■■□□ 2.15
Samm50Q8BGH2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Samm50Q8BGH2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.45■■■□□ 2.14
Samm50Q8BGH2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Samm50Q8BGH2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Samm50Q8BGH2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Samm50Q8BGH2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.42■■■□□ 2.14
Samm50Q8BGH2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Samm50Q8BGH2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Samm50Q8BGH2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.42■■■□□ 2.14
Samm50Q8BGH2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Samm50Q8BGH2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.41■■■□□ 2.14
Samm50Q8BGH2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.41■■■□□ 2.14
Samm50Q8BGH2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Samm50Q8BGH2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Samm50Q8BGH2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Samm50Q8BGH2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Samm50Q8BGH2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Samm50Q8BGH2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Samm50Q8BGH2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.36■■■□□ 2.13
Samm50Q8BGH2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Samm50Q8BGH2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Samm50Q8BGH2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.35■■■□□ 2.13
Samm50Q8BGH2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Samm50Q8BGH2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms