Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.96■□□□□ 0.95
Clns1aQ61189 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Clns1aQ61189 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clns1aQ61189 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.95■□□□□ 0.94
Clns1aQ61189 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clns1aQ61189 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clns1aQ61189 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clns1aQ61189 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clns1aQ61189 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.94■□□□□ 0.94
Clns1aQ61189 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clns1aQ61189 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clns1aQ61189 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clns1aQ61189 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Clns1aQ61189 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clns1aQ61189 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.91■□□□□ 0.94
Clns1aQ61189 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clns1aQ61189 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clns1aQ61189 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clns1aQ61189 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clns1aQ61189 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clns1aQ61189 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clns1aQ61189 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.94
Clns1aQ61189 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clns1aQ61189 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clns1aQ61189 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Clns1aQ61189 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clns1aQ61189 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clns1aQ61189 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.87■□□□□ 0.93
Clns1aQ61189 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clns1aQ61189 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clns1aQ61189 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clns1aQ61189 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clns1aQ61189 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clns1aQ61189 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.85■□□□□ 0.93
Clns1aQ61189 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clns1aQ61189 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Clns1aQ61189 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clns1aQ61189 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clns1aQ61189 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clns1aQ61189 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.83■□□□□ 0.93
Clns1aQ61189 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clns1aQ61189 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clns1aQ61189 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clns1aQ61189 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clns1aQ61189 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clns1aQ61189 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.81■□□□□ 0.92
Clns1aQ61189 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Clns1aQ61189 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Clns1aQ61189 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clns1aQ61189 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clns1aQ61189 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clns1aQ61189 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clns1aQ61189 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clns1aQ61189 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clns1aQ61189 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Clns1aQ61189 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clns1aQ61189 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clns1aQ61189 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clns1aQ61189 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Clns1aQ61189 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Clns1aQ61189 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clns1aQ61189 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clns1aQ61189 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Clns1aQ61189 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.74■□□□□ 0.91
Clns1aQ61189 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clns1aQ61189 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Clns1aQ61189 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.72■□□□□ 0.91
Clns1aQ61189 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clns1aQ61189 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Clns1aQ61189 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clns1aQ61189 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clns1aQ61189 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.72■□□□□ 0.91
Clns1aQ61189 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clns1aQ61189 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.71■□□□□ 0.91
Clns1aQ61189 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Clns1aQ61189 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clns1aQ61189 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Clns1aQ61189 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clns1aQ61189 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clns1aQ61189 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clns1aQ61189 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clns1aQ61189 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clns1aQ61189 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clns1aQ61189 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clns1aQ61189 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clns1aQ61189 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clns1aQ61189 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clns1aQ61189 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clns1aQ61189 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clns1aQ61189 Gm25262-201ENSMUST00000174934 133 ntBASIC20.65■□□□□ 0.9
Clns1aQ61189 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clns1aQ61189 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clns1aQ61189 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clns1aQ61189 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clns1aQ61189 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clns1aQ61189 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Clns1aQ61189 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clns1aQ61189 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clns1aQ61189 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clns1aQ61189 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 170.7 ms