Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarb1Q61009 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarb1Q61009 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.63■□□□□ 0.89
Scarb1Q61009 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarb1Q61009 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scarb1Q61009 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.61■□□□□ 0.89
Scarb1Q61009 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scarb1Q61009 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Scarb1Q61009 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Scarb1Q61009 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scarb1Q61009 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarb1Q61009 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scarb1Q61009 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scarb1Q61009 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scarb1Q61009 Gm27322-201ENSMUST00000184007 104 ntBASIC20.59■□□□□ 0.89
Scarb1Q61009 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.58■□□□□ 0.89
Scarb1Q61009 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Scarb1Q61009 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Scarb1Q61009 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Scarb1Q61009 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scarb1Q61009 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scarb1Q61009 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.56■□□□□ 0.88
Scarb1Q61009 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scarb1Q61009 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Scarb1Q61009 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarb1Q61009 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.55■□□□□ 0.88
Scarb1Q61009 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scarb1Q61009 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarb1Q61009 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarb1Q61009 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarb1Q61009 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarb1Q61009 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scarb1Q61009 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarb1Q61009 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.53■□□□□ 0.88
Scarb1Q61009 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scarb1Q61009 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scarb1Q61009 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarb1Q61009 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarb1Q61009 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarb1Q61009 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scarb1Q61009 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scarb1Q61009 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scarb1Q61009 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scarb1Q61009 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scarb1Q61009 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scarb1Q61009 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.47■□□□□ 0.87
Scarb1Q61009 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Scarb1Q61009 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scarb1Q61009 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scarb1Q61009 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scarb1Q61009 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scarb1Q61009 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Scarb1Q61009 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scarb1Q61009 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scarb1Q61009 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scarb1Q61009 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scarb1Q61009 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scarb1Q61009 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scarb1Q61009 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scarb1Q61009 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.42■□□□□ 0.86
Scarb1Q61009 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scarb1Q61009 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scarb1Q61009 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scarb1Q61009 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Scarb1Q61009 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scarb1Q61009 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scarb1Q61009 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scarb1Q61009 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scarb1Q61009 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scarb1Q61009 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scarb1Q61009 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scarb1Q61009 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scarb1Q61009 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
Scarb1Q61009 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scarb1Q61009 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scarb1Q61009 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scarb1Q61009 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scarb1Q61009 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scarb1Q61009 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scarb1Q61009 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.34■□□□□ 0.85
Scarb1Q61009 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scarb1Q61009 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scarb1Q61009 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scarb1Q61009 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarb1Q61009 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scarb1Q61009 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarb1Q61009 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scarb1Q61009 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Scarb1Q61009 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scarb1Q61009 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scarb1Q61009 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scarb1Q61009 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scarb1Q61009 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scarb1Q61009 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Scarb1Q61009 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.29■□□□□ 0.84
Scarb1Q61009 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scarb1Q61009 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Scarb1Q61009 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Scarb1Q61009 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scarb1Q61009 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms