Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Gm25262-201ENSMUST00000174934 133 ntBASIC19.06■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.04■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.02■□□□□ 0.64
Trav15-1-dv6-1Q5R1D2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.98■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.97■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Gm27322-201ENSMUST00000184007 104 ntBASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15-1-dv6-1Q5R1D2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.93■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav15-1-dv6-1Q5R1D2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.84■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav15-1-dv6-1Q5R1D2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav15-1-dv6-1Q5R1D2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms