Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gcm1P70348 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gcm1P70348 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Gcm1P70348 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Gcm1P70348 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gcm1P70348 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gcm1P70348 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gcm1P70348 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gcm1P70348 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gcm1P70348 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.63■□□□□ 0.89
Gcm1P70348 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Gcm1P70348 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gcm1P70348 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.61■□□□□ 0.89
Gcm1P70348 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gcm1P70348 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gcm1P70348 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.59■□□□□ 0.89
Gcm1P70348 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.59■□□□□ 0.89
Gcm1P70348 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gcm1P70348 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gcm1P70348 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.57■□□□□ 0.88
Gcm1P70348 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gcm1P70348 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gcm1P70348 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gcm1P70348 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Gcm1P70348 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gcm1P70348 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gcm1P70348 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gcm1P70348 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gcm1P70348 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.52■□□□□ 0.88
Gcm1P70348 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gcm1P70348 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gcm1P70348 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gcm1P70348 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gcm1P70348 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gcm1P70348 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gcm1P70348 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gcm1P70348 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Gcm1P70348 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gcm1P70348 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gcm1P70348 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gcm1P70348 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gcm1P70348 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gcm1P70348 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gcm1P70348 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Gcm1P70348 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Gcm1P70348 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gcm1P70348 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.42■□□□□ 0.86
Gcm1P70348 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.42■□□□□ 0.86
Gcm1P70348 Zxda-201ENSMUST00000117281 2621 ntBASIC20.41■□□□□ 0.86
Gcm1P70348 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Gcm1P70348 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gcm1P70348 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Gcm1P70348 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.4■□□□□ 0.86
Gcm1P70348 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.4■□□□□ 0.86
Gcm1P70348 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gcm1P70348 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gcm1P70348 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.37■□□□□ 0.85
Gcm1P70348 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Gcm1P70348 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gcm1P70348 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gcm1P70348 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gcm1P70348 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gcm1P70348 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gcm1P70348 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gcm1P70348 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gcm1P70348 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gcm1P70348 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gcm1P70348 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gcm1P70348 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gcm1P70348 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gcm1P70348 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.3■□□□□ 0.84
Gcm1P70348 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.3■□□□□ 0.84
Gcm1P70348 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gcm1P70348 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gcm1P70348 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gcm1P70348 Gm8503-201ENSMUST00000118131 455 ntBASIC20.29■□□□□ 0.84
Gcm1P70348 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gcm1P70348 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gcm1P70348 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gcm1P70348 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gcm1P70348 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gcm1P70348 Gm6821-201ENSMUST00000107540 542 ntBASIC20.27■□□□□ 0.84
Gcm1P70348 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gcm1P70348 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gcm1P70348 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Gcm1P70348 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.25■□□□□ 0.83
Gcm1P70348 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gcm1P70348 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.25■□□□□ 0.83
Gcm1P70348 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gcm1P70348 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms