Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfn1P62962 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfn1P62962 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pfn1P62962 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfn1P62962 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfn1P62962 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfn1P62962 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pfn1P62962 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfn1P62962 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfn1P62962 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pfn1P62962 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.1■□□□□ 0.65
Pfn1P62962 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pfn1P62962 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pfn1P62962 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.08■□□□□ 0.65
Pfn1P62962 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
Pfn1P62962 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pfn1P62962 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pfn1P62962 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pfn1P62962 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pfn1P62962 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pfn1P62962 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfn1P62962 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfn1P62962 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pfn1P62962 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pfn1P62962 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pfn1P62962 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pfn1P62962 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pfn1P62962 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.01■□□□□ 0.63
Pfn1P62962 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pfn1P62962 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfn1P62962 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfn1P62962 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pfn1P62962 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfn1P62962 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfn1P62962 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfn1P62962 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfn1P62962 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfn1P62962 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfn1P62962 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfn1P62962 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfn1P62962 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Pfn1P62962 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfn1P62962 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pfn1P62962 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfn1P62962 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Pfn1P62962 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfn1P62962 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfn1P62962 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfn1P62962 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pfn1P62962 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Pfn1P62962 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfn1P62962 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfn1P62962 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfn1P62962 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pfn1P62962 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pfn1P62962 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfn1P62962 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pfn1P62962 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pfn1P62962 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pfn1P62962 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfn1P62962 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfn1P62962 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfn1P62962 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfn1P62962 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pfn1P62962 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfn1P62962 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfn1P62962 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pfn1P62962 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pfn1P62962 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pfn1P62962 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfn1P62962 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfn1P62962 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfn1P62962 Gm25262-201ENSMUST00000174934 133 ntBASIC18.83■□□□□ 0.6
Pfn1P62962 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfn1P62962 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfn1P62962 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.81■□□□□ 0.6
Pfn1P62962 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfn1P62962 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfn1P62962 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.8■□□□□ 0.6
Pfn1P62962 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfn1P62962 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfn1P62962 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfn1P62962 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfn1P62962 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfn1P62962 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfn1P62962 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pfn1P62962 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfn1P62962 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pfn1P62962 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfn1P62962 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pfn1P62962 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfn1P62962 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfn1P62962 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.77■□□□□ 0.6
Pfn1P62962 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfn1P62962 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfn1P62962 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfn1P62962 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfn1P62962 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pfn1P62962 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfn1P62962 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms