Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm6P62313 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm6P62313 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.77■■□□□ 1.08
Lsm6P62313 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Lsm6P62313 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Lsm6P62313 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm6P62313 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm6P62313 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm6P62313 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm6P62313 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.74■■□□□ 1.07
Lsm6P62313 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm6P62313 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.74■■□□□ 1.07
Lsm6P62313 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Lsm6P62313 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm6P62313 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Lsm6P62313 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm6P62313 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm6P62313 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm6P62313 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm6P62313 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm6P62313 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm6P62313 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.69■■□□□ 1.06
Lsm6P62313 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.69■■□□□ 1.06
Lsm6P62313 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.68■■□□□ 1.06
Lsm6P62313 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm6P62313 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm6P62313 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm6P62313 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.65■■□□□ 1.06
Lsm6P62313 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm6P62313 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Lsm6P62313 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm6P62313 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm6P62313 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm6P62313 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm6P62313 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.63■■□□□ 1.05
Lsm6P62313 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm6P62313 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm6P62313 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Lsm6P62313 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm6P62313 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm6P62313 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm6P62313 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm6P62313 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm6P62313 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm6P62313 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Lsm6P62313 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Amer2-203ENSMUST00000225247 2662 ntBASIC21.54■■□□□ 1.04
Lsm6P62313 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.54■■□□□ 1.04
Lsm6P62313 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Lsm6P62313 Zfp131-205ENSMUST00000223812 663 ntBASIC21.53■■□□□ 1.04
Lsm6P62313 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Lsm6P62313 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm6P62313 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.53■■□□□ 1.04
Lsm6P62313 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm6P62313 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lsm6P62313 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm6P62313 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lsm6P62313 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm6P62313 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.5■■□□□ 1.03
Lsm6P62313 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm6P62313 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm6P62313 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.48■■□□□ 1.03
Lsm6P62313 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm6P62313 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm6P62313 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.46■■□□□ 1.03
Lsm6P62313 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.45■■□□□ 1.02
Lsm6P62313 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm6P62313 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.44■■□□□ 1.02
Lsm6P62313 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm6P62313 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm6P62313 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lsm6P62313 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.42■■□□□ 1.02
Lsm6P62313 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm6P62313 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm6P62313 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm6P62313 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Lsm6P62313 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.39■■□□□ 1.02
Lsm6P62313 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm6P62313 Gm9397-201ENSMUST00000200125 605 ntBASIC21.39■■□□□ 1.01
Lsm6P62313 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms