Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rom1P32958 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rom1P32958 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rom1P32958 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rom1P32958 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.48■□□□□ 0.71
Rom1P32958 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.48■□□□□ 0.71
Rom1P32958 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rom1P32958 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rom1P32958 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.47■□□□□ 0.71
Rom1P32958 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rom1P32958 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rom1P32958 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rom1P32958 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rom1P32958 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rom1P32958 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rom1P32958 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rom1P32958 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rom1P32958 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rom1P32958 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rom1P32958 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rom1P32958 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rom1P32958 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rom1P32958 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rom1P32958 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rom1P32958 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rom1P32958 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rom1P32958 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rom1P32958 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rom1P32958 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.41■□□□□ 0.7
Rom1P32958 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rom1P32958 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rom1P32958 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rom1P32958 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rom1P32958 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rom1P32958 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rom1P32958 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rom1P32958 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rom1P32958 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.38■□□□□ 0.69
Rom1P32958 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rom1P32958 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rom1P32958 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Rom1P32958 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.36■□□□□ 0.69
Rom1P32958 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rom1P32958 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rom1P32958 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.36■□□□□ 0.69
Rom1P32958 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rom1P32958 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rom1P32958 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rom1P32958 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rom1P32958 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rom1P32958 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rom1P32958 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rom1P32958 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rom1P32958 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rom1P32958 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rom1P32958 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rom1P32958 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rom1P32958 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.31■□□□□ 0.68
Rom1P32958 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rom1P32958 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rom1P32958 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rom1P32958 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rom1P32958 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rom1P32958 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Rom1P32958 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rom1P32958 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rom1P32958 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rom1P32958 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rom1P32958 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rom1P32958 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rom1P32958 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rom1P32958 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rom1P32958 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rom1P32958 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rom1P32958 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rom1P32958 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rom1P32958 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rom1P32958 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rom1P32958 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rom1P32958 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rom1P32958 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rom1P32958 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rom1P32958 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.22■□□□□ 0.67
Rom1P32958 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rom1P32958 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rom1P32958 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rom1P32958 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rom1P32958 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Rom1P32958 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rom1P32958 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rom1P32958 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Rom1P32958 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rom1P32958 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rom1P32958 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.19■□□□□ 0.66
Rom1P32958 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
Rom1P32958 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.18■□□□□ 0.66
Rom1P32958 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rom1P32958 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rom1P32958 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rom1P32958 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms