Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim1P0C8K7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim1P0C8K7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim1P0C8K7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim1P0C8K7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smim1P0C8K7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim1P0C8K7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim1P0C8K7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim1P0C8K7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim1P0C8K7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim1P0C8K7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim1P0C8K7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim1P0C8K7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Smim1P0C8K7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim1P0C8K7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim1P0C8K7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim1P0C8K7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim1P0C8K7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smim1P0C8K7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim1P0C8K7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim1P0C8K7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.07■□□□□ 0.32
Smim1P0C8K7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim1P0C8K7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim1P0C8K7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim1P0C8K7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smim1P0C8K7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim1P0C8K7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim1P0C8K7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim1P0C8K7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim1P0C8K7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smim1P0C8K7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim1P0C8K7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smim1P0C8K7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim1P0C8K7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim1P0C8K7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smim1P0C8K7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim1P0C8K7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smim1P0C8K7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smim1P0C8K7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim1P0C8K7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Smim1P0C8K7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim1P0C8K7 Gm17641-201ENSMUST00000166328 2350 ntBASIC17■□□□□ 0.31
Smim1P0C8K7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smim1P0C8K7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim1P0C8K7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim1P0C8K7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim1P0C8K7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim1P0C8K7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim1P0C8K7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smim1P0C8K7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim1P0C8K7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smim1P0C8K7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smim1P0C8K7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim1P0C8K7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smim1P0C8K7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Smim1P0C8K7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smim1P0C8K7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Smim1P0C8K7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smim1P0C8K7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smim1P0C8K7 Mipep-204ENSMUST00000225043 1548 ntBASIC16.93■□□□□ 0.3
Smim1P0C8K7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Smim1P0C8K7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim1P0C8K7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim1P0C8K7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.92■□□□□ 0.3
Smim1P0C8K7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim1P0C8K7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smim1P0C8K7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim1P0C8K7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim1P0C8K7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smim1P0C8K7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim1P0C8K7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim1P0C8K7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim1P0C8K7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smim1P0C8K7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smim1P0C8K7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smim1P0C8K7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim1P0C8K7 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.89■□□□□ 0.29
Smim1P0C8K7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smim1P0C8K7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim1P0C8K7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.87■□□□□ 0.29
Smim1P0C8K7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim1P0C8K7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smim1P0C8K7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smim1P0C8K7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smim1P0C8K7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smim1P0C8K7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.85■□□□□ 0.29
Smim1P0C8K7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smim1P0C8K7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smim1P0C8K7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.84■□□□□ 0.29
Smim1P0C8K7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim1P0C8K7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim1P0C8K7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smim1P0C8K7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim1P0C8K7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smim1P0C8K7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim1P0C8K7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim1P0C8K7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim1P0C8K7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smim1P0C8K7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim1P0C8K7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms