Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc1P07903 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.49■□□□□ 0.87
Ercc1P07903 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc1P07903 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc1P07903 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ercc1P07903 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.48■□□□□ 0.87
Ercc1P07903 Gm26115-201ENSMUST00000175605 87 ntBASIC20.48■□□□□ 0.87
Ercc1P07903 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ercc1P07903 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ercc1P07903 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.47■□□□□ 0.87
Ercc1P07903 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ercc1P07903 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc1P07903 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc1P07903 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.46■□□□□ 0.87
Ercc1P07903 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc1P07903 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.46■□□□□ 0.87
Ercc1P07903 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Ercc1P07903 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc1P07903 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc1P07903 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Ercc1P07903 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc1P07903 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc1P07903 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ercc1P07903 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ercc1P07903 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc1P07903 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.42■□□□□ 0.86
Ercc1P07903 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Ercc1P07903 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ercc1P07903 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc1P07903 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ercc1P07903 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc1P07903 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc1P07903 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ercc1P07903 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ercc1P07903 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ercc1P07903 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc1P07903 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Ercc1P07903 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ercc1P07903 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ercc1P07903 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc1P07903 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ercc1P07903 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ercc1P07903 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ercc1P07903 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ercc1P07903 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.34■□□□□ 0.85
Ercc1P07903 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Ercc1P07903 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Ercc1P07903 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.34■□□□□ 0.85
Ercc1P07903 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ercc1P07903 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ercc1P07903 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc1P07903 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc1P07903 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc1P07903 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.31■□□□□ 0.84
Ercc1P07903 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc1P07903 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc1P07903 Gm8109-201ENSMUST00000194076 746 ntBASIC20.31■□□□□ 0.84
Ercc1P07903 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc1P07903 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc1P07903 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.3■□□□□ 0.84
Ercc1P07903 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.3■□□□□ 0.84
Ercc1P07903 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc1P07903 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc1P07903 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc1P07903 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc1P07903 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ercc1P07903 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ercc1P07903 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.27■□□□□ 0.84
Ercc1P07903 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ercc1P07903 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc1P07903 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc1P07903 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc1P07903 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc1P07903 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc1P07903 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc1P07903 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc1P07903 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc1P07903 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc1P07903 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ercc1P07903 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ercc1P07903 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ercc1P07903 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ercc1P07903 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ercc1P07903 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc1P07903 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc1P07903 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc1P07903 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.21■□□□□ 0.83
Ercc1P07903 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc1P07903 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc1P07903 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc1P07903 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc1P07903 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ercc1P07903 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.19■□□□□ 0.82
Ercc1P07903 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc1P07903 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ercc1P07903 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc1P07903 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.18■□□□□ 0.82
Ercc1P07903 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc1P07903 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc1P07903 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms