Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hbb-b1P02088 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hbb-b1P02088 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hbb-b1P02088 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hbb-b1P02088 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Hbb-b1P02088 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hbb-b1P02088 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hbb-b1P02088 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hbb-b1P02088 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hbb-b1P02088 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hbb-b1P02088 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hbb-b1P02088 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hbb-b1P02088 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hbb-b1P02088 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hbb-b1P02088 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hbb-b1P02088 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hbb-b1P02088 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hbb-b1P02088 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hbb-b1P02088 Gm27325-201ENSMUST00000175467 74 ntBASIC17.4■□□□□ 0.38
Hbb-b1P02088 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hbb-b1P02088 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hbb-b1P02088 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hbb-b1P02088 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hbb-b1P02088 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hbb-b1P02088 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hbb-b1P02088 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hbb-b1P02088 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hbb-b1P02088 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hbb-b1P02088 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hbb-b1P02088 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.36■□□□□ 0.37
Hbb-b1P02088 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hbb-b1P02088 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hbb-b1P02088 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hbb-b1P02088 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hbb-b1P02088 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hbb-b1P02088 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hbb-b1P02088 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hbb-b1P02088 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hbb-b1P02088 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hbb-b1P02088 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hbb-b1P02088 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hbb-b1P02088 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hbb-b1P02088 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hbb-b1P02088 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hbb-b1P02088 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.31■□□□□ 0.36
Hbb-b1P02088 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hbb-b1P02088 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hbb-b1P02088 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hbb-b1P02088 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.3■□□□□ 0.36
Hbb-b1P02088 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hbb-b1P02088 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hbb-b1P02088 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hbb-b1P02088 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hbb-b1P02088 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hbb-b1P02088 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hbb-b1P02088 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hbb-b1P02088 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hbb-b1P02088 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Hbb-b1P02088 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Hbb-b1P02088 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hbb-b1P02088 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hbb-b1P02088 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hbb-b1P02088 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hbb-b1P02088 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hbb-b1P02088 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.27■□□□□ 0.36
Hbb-b1P02088 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hbb-b1P02088 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hbb-b1P02088 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hbb-b1P02088 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hbb-b1P02088 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hbb-b1P02088 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hbb-b1P02088 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Hbb-b1P02088 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hbb-b1P02088 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hbb-b1P02088 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hbb-b1P02088 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hbb-b1P02088 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hbb-b1P02088 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hbb-b1P02088 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hbb-b1P02088 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hbb-b1P02088 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hbb-b1P02088 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hbb-b1P02088 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hbb-b1P02088 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.22■□□□□ 0.35
Hbb-b1P02088 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Hbb-b1P02088 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Hbb-b1P02088 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hbb-b1P02088 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hbb-b1P02088 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hbb-b1P02088 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hbb-b1P02088 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hbb-b1P02088 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hbb-b1P02088 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbb-b1P02088 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbb-b1P02088 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbb-b1P02088 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbb-b1P02088 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbb-b1P02088 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbb-b1P02088 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Hbb-b1P02088 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms