Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Kcnu1O54982 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Kcnu1O54982 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Kcnu1O54982 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Kcnu1O54982 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Kcnu1O54982 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
Kcnu1O54982 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Kcnu1O54982 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Kcnu1O54982 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.58■■□□□ 1.85
Kcnu1O54982 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Kcnu1O54982 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.57■■□□□ 1.84
Kcnu1O54982 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Kcnu1O54982 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Kcnu1O54982 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Kcnu1O54982 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Kcnu1O54982 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Kcnu1O54982 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Kcnu1O54982 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Kcnu1O54982 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Kcnu1O54982 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.53■■□□□ 1.84
Kcnu1O54982 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Kcnu1O54982 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Kcnu1O54982 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.52■■□□□ 1.84
Kcnu1O54982 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Kcnu1O54982 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.5■■□□□ 1.83
Kcnu1O54982 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Kcnu1O54982 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnu1O54982 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Kcnu1O54982 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Kcnu1O54982 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Kcnu1O54982 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Kcnu1O54982 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Kcnu1O54982 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Kcnu1O54982 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Kcnu1O54982 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Kcnu1O54982 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Kcnu1O54982 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
Kcnu1O54982 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Kcnu1O54982 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.42■■□□□ 1.82
Kcnu1O54982 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Kcnu1O54982 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Kcnu1O54982 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Kcnu1O54982 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Kcnu1O54982 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Kcnu1O54982 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Kcnu1O54982 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Kcnu1O54982 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Kcnu1O54982 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Kcnu1O54982 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
Kcnu1O54982 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Kcnu1O54982 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Kcnu1O54982 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Kcnu1O54982 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Kcnu1O54982 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Kcnu1O54982 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Kcnu1O54982 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Kcnu1O54982 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Kcnu1O54982 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Kcnu1O54982 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.34■■□□□ 1.81
Kcnu1O54982 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Kcnu1O54982 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Kcnu1O54982 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.33■■□□□ 1.81
Kcnu1O54982 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.32■■□□□ 1.8
Kcnu1O54982 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Kcnu1O54982 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.3■■□□□ 1.8
Kcnu1O54982 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Kcnu1O54982 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kcnu1O54982 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kcnu1O54982 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Kcnu1O54982 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Kcnu1O54982 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kcnu1O54982 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Kcnu1O54982 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kcnu1O54982 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kcnu1O54982 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Kcnu1O54982 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kcnu1O54982 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kcnu1O54982 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kcnu1O54982 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.24■■□□□ 1.79
Kcnu1O54982 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Kcnu1O54982 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kcnu1O54982 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kcnu1O54982 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kcnu1O54982 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Kcnu1O54982 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.2■■□□□ 1.78
Kcnu1O54982 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Kcnu1O54982 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Kcnu1O54982 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Kcnu1O54982 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Kcnu1O54982 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Kcnu1O54982 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kcnu1O54982 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Kcnu1O54982 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Kcnu1O54982 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Kcnu1O54982 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Kcnu1O54982 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Kcnu1O54982 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Kcnu1O54982 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.11■■□□□ 1.77
Kcnu1O54982 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Kcnu1O54982 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms