Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa1O35683 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa1O35683 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.56■□□□□ 0.4
Ndufa1O35683 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa1O35683 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa1O35683 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa1O35683 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa1O35683 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa1O35683 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ndufa1O35683 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa1O35683 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.51■□□□□ 0.39
Ndufa1O35683 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa1O35683 Mipep-204ENSMUST00000225043 1548 ntBASIC17.51■□□□□ 0.39
Ndufa1O35683 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa1O35683 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa1O35683 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa1O35683 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ndufa1O35683 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Ndufa1O35683 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa1O35683 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa1O35683 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa1O35683 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ndufa1O35683 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ndufa1O35683 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa1O35683 Gm27322-201ENSMUST00000184007 104 ntBASIC17.46■□□□□ 0.39
Ndufa1O35683 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.46■□□□□ 0.39
Ndufa1O35683 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa1O35683 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ndufa1O35683 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ndufa1O35683 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa1O35683 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufa1O35683 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ndufa1O35683 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufa1O35683 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufa1O35683 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufa1O35683 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.43■□□□□ 0.38
Ndufa1O35683 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa1O35683 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa1O35683 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa1O35683 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.41■□□□□ 0.38
Ndufa1O35683 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ndufa1O35683 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndufa1O35683 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndufa1O35683 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ndufa1O35683 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ndufa1O35683 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ndufa1O35683 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ndufa1O35683 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ndufa1O35683 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.37■□□□□ 0.37
Ndufa1O35683 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndufa1O35683 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ndufa1O35683 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Ndufa1O35683 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndufa1O35683 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndufa1O35683 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa1O35683 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ndufa1O35683 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa1O35683 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ndufa1O35683 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa1O35683 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Ndufa1O35683 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa1O35683 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa1O35683 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndufa1O35683 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa1O35683 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa1O35683 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa1O35683 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.32■□□□□ 0.36
Ndufa1O35683 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.31■□□□□ 0.36
Ndufa1O35683 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ndufa1O35683 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.3■□□□□ 0.36
Ndufa1O35683 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndufa1O35683 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ndufa1O35683 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ndufa1O35683 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ndufa1O35683 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Ndufa1O35683 Gm26115-201ENSMUST00000175605 87 ntBASIC17.27■□□□□ 0.36
Ndufa1O35683 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndufa1O35683 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ndufa1O35683 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa1O35683 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa1O35683 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa1O35683 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa1O35683 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa1O35683 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ndufa1O35683 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufa1O35683 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufa1O35683 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms