Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Raet1cO08604 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Raet1cO08604 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Raet1cO08604 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Raet1cO08604 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Raet1cO08604 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Raet1cO08604 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.08■■□□□ 1.13
Raet1cO08604 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.07■■□□□ 1.12
Raet1cO08604 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Raet1cO08604 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Raet1cO08604 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Raet1cO08604 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Raet1cO08604 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Raet1cO08604 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Raet1cO08604 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
Raet1cO08604 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.03■■□□□ 1.12
Raet1cO08604 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Raet1cO08604 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Raet1cO08604 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Raet1cO08604 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Raet1cO08604 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Raet1cO08604 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Raet1cO08604 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Raet1cO08604 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Raet1cO08604 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Raet1cO08604 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Raet1cO08604 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Raet1cO08604 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.99■■□□□ 1.11
Raet1cO08604 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Raet1cO08604 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Raet1cO08604 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Raet1cO08604 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Raet1cO08604 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Raet1cO08604 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Raet1cO08604 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Raet1cO08604 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Raet1cO08604 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.96■■□□□ 1.11
Raet1cO08604 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.96■■□□□ 1.11
Raet1cO08604 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Raet1cO08604 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Raet1cO08604 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Raet1cO08604 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Raet1cO08604 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Raet1cO08604 Zfp131-205ENSMUST00000223812 663 ntBASIC21.93■■□□□ 1.1
Raet1cO08604 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Raet1cO08604 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Raet1cO08604 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.92■■□□□ 1.1
Raet1cO08604 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Raet1cO08604 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.91■■□□□ 1.1
Raet1cO08604 Amer2-203ENSMUST00000225247 2662 ntBASIC21.9■■□□□ 1.1
Raet1cO08604 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.89■■□□□ 1.1
Raet1cO08604 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Raet1cO08604 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.89■■□□□ 1.09
Raet1cO08604 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Raet1cO08604 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Raet1cO08604 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Raet1cO08604 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Raet1cO08604 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Raet1cO08604 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Raet1cO08604 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Raet1cO08604 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Raet1cO08604 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Raet1cO08604 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Raet1cO08604 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.84■■□□□ 1.09
Raet1cO08604 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Raet1cO08604 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Raet1cO08604 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Raet1cO08604 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Raet1cO08604 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.8■■□□□ 1.08
Raet1cO08604 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Raet1cO08604 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Raet1cO08604 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Raet1cO08604 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1cO08604 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1cO08604 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Raet1cO08604 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1cO08604 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Raet1cO08604 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Raet1cO08604 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.78■■□□□ 1.08
Raet1cO08604 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Raet1cO08604 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.77■■□□□ 1.08
Raet1cO08604 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Raet1cO08604 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.76■■□□□ 1.07
Raet1cO08604 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Raet1cO08604 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Raet1cO08604 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raet1cO08604 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.75■■□□□ 1.07
Raet1cO08604 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Raet1cO08604 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Raet1cO08604 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Raet1cO08604 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Raet1cO08604 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Raet1cO08604 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Raet1cO08604 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Raet1cO08604 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Raet1cO08604 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.71■■□□□ 1.07
Raet1cO08604 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.71■■□□□ 1.07
Raet1cO08604 Gm9397-201ENSMUST00000200125 605 ntBASIC21.71■■□□□ 1.07
Raet1cO08604 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Raet1cO08604 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms