Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx6-2D3Z4R4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx6-2D3Z4R4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Nkx6-2D3Z4R4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-2D3Z4R4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20■□□□□ 0.79
Nkx6-2D3Z4R4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Nkx6-2D3Z4R4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.98■□□□□ 0.79
Nkx6-2D3Z4R4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-2D3Z4R4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-2D3Z4R4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-2D3Z4R4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-2D3Z4R4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-2D3Z4R4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-2D3Z4R4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-2D3Z4R4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-2D3Z4R4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-2D3Z4R4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx6-2D3Z4R4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx6-2D3Z4R4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-2D3Z4R4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Nkx6-2D3Z4R4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-2D3Z4R4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Gm27325-201ENSMUST00000175467 74 ntBASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-2D3Z4R4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-2D3Z4R4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-2D3Z4R4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Nkx6-2D3Z4R4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Nkx6-2D3Z4R4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-2D3Z4R4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-2D3Z4R4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nkx6-2D3Z4R4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx6-2D3Z4R4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.84■□□□□ 0.77
Nkx6-2D3Z4R4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx6-2D3Z4R4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx6-2D3Z4R4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx6-2D3Z4R4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nkx6-2D3Z4R4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx6-2D3Z4R4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx6-2D3Z4R4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Nkx6-2D3Z4R4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-2D3Z4R4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.78■□□□□ 0.76
Nkx6-2D3Z4R4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-2D3Z4R4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-2D3Z4R4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-2D3Z4R4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-2D3Z4R4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Nkx6-2D3Z4R4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-2D3Z4R4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Nkx6-2D3Z4R4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-2D3Z4R4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-2D3Z4R4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms