Protein–RNA interactions for Protein: A2BED8

Samt1, Predicted gene 10057, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samt1A2BED8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samt1A2BED8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Samt1A2BED8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samt1A2BED8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samt1A2BED8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samt1A2BED8 Gm26115-201ENSMUST00000175605 87 ntBASIC19.68■□□□□ 0.74
Samt1A2BED8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samt1A2BED8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Samt1A2BED8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.68■□□□□ 0.74
Samt1A2BED8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samt1A2BED8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samt1A2BED8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Samt1A2BED8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samt1A2BED8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Samt1A2BED8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Samt1A2BED8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samt1A2BED8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Samt1A2BED8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samt1A2BED8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samt1A2BED8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Samt1A2BED8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samt1A2BED8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Samt1A2BED8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samt1A2BED8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Samt1A2BED8 Gm8109-201ENSMUST00000194076 746 ntBASIC19.61■□□□□ 0.73
Samt1A2BED8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samt1A2BED8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samt1A2BED8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samt1A2BED8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samt1A2BED8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samt1A2BED8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Samt1A2BED8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samt1A2BED8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Samt1A2BED8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Samt1A2BED8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Samt1A2BED8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Samt1A2BED8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samt1A2BED8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samt1A2BED8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samt1A2BED8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samt1A2BED8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samt1A2BED8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samt1A2BED8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samt1A2BED8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Samt1A2BED8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samt1A2BED8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Samt1A2BED8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samt1A2BED8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samt1A2BED8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Samt1A2BED8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samt1A2BED8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samt1A2BED8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samt1A2BED8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Samt1A2BED8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samt1A2BED8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samt1A2BED8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Samt1A2BED8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samt1A2BED8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samt1A2BED8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Samt1A2BED8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.49■□□□□ 0.71
Samt1A2BED8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Samt1A2BED8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.49■□□□□ 0.71
Samt1A2BED8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Samt1A2BED8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Samt1A2BED8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Samt1A2BED8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Samt1A2BED8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Samt1A2BED8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.47■□□□□ 0.71
Samt1A2BED8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Samt1A2BED8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.46■□□□□ 0.71
Samt1A2BED8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Samt1A2BED8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Samt1A2BED8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Samt1A2BED8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samt1A2BED8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Samt1A2BED8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.43■□□□□ 0.7
Samt1A2BED8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Samt1A2BED8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samt1A2BED8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samt1A2BED8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samt1A2BED8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samt1A2BED8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samt1A2BED8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samt1A2BED8 Peli2-204ENSMUST00000226513 1320 ntBASIC19.4■□□□□ 0.7
Samt1A2BED8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samt1A2BED8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samt1A2BED8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samt1A2BED8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samt1A2BED8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Samt1A2BED8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Samt1A2BED8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samt1A2BED8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Samt1A2BED8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Samt1A2BED8 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.37■□□□□ 0.69
Samt1A2BED8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samt1A2BED8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samt1A2BED8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samt1A2BED8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Samt1A2BED8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Samt1A2BED8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms