Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lnp1A0A1B0GSK3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lnp1A0A1B0GSK3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lnp1A0A1B0GSK3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lnp1A0A1B0GSK3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lnp1A0A1B0GSK3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lnp1A0A1B0GSK3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lnp1A0A1B0GSK3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lnp1A0A1B0GSK3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lnp1A0A1B0GSK3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lnp1A0A1B0GSK3 Amer2-203ENSMUST00000225247 2662 ntBASIC20.53■□□□□ 0.88
Lnp1A0A1B0GSK3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lnp1A0A1B0GSK3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lnp1A0A1B0GSK3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Lnp1A0A1B0GSK3 Zfp131-205ENSMUST00000223812 663 ntBASIC20.52■□□□□ 0.88
Lnp1A0A1B0GSK3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
Lnp1A0A1B0GSK3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lnp1A0A1B0GSK3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lnp1A0A1B0GSK3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lnp1A0A1B0GSK3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lnp1A0A1B0GSK3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lnp1A0A1B0GSK3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lnp1A0A1B0GSK3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lnp1A0A1B0GSK3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lnp1A0A1B0GSK3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.48■□□□□ 0.87
Lnp1A0A1B0GSK3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lnp1A0A1B0GSK3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lnp1A0A1B0GSK3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lnp1A0A1B0GSK3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lnp1A0A1B0GSK3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lnp1A0A1B0GSK3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lnp1A0A1B0GSK3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lnp1A0A1B0GSK3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lnp1A0A1B0GSK3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lnp1A0A1B0GSK3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.45■□□□□ 0.86
Lnp1A0A1B0GSK3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lnp1A0A1B0GSK3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lnp1A0A1B0GSK3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lnp1A0A1B0GSK3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lnp1A0A1B0GSK3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.43■□□□□ 0.86
Lnp1A0A1B0GSK3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.43■□□□□ 0.86
Lnp1A0A1B0GSK3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.43■□□□□ 0.86
Lnp1A0A1B0GSK3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.43■□□□□ 0.86
Lnp1A0A1B0GSK3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lnp1A0A1B0GSK3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lnp1A0A1B0GSK3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lnp1A0A1B0GSK3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lnp1A0A1B0GSK3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.41■□□□□ 0.86
Lnp1A0A1B0GSK3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.41■□□□□ 0.86
Lnp1A0A1B0GSK3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Lnp1A0A1B0GSK3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lnp1A0A1B0GSK3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.4■□□□□ 0.86
Lnp1A0A1B0GSK3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lnp1A0A1B0GSK3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lnp1A0A1B0GSK3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lnp1A0A1B0GSK3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lnp1A0A1B0GSK3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lnp1A0A1B0GSK3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lnp1A0A1B0GSK3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lnp1A0A1B0GSK3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.35■□□□□ 0.85
Lnp1A0A1B0GSK3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lnp1A0A1B0GSK3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Lnp1A0A1B0GSK3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lnp1A0A1B0GSK3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Lnp1A0A1B0GSK3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lnp1A0A1B0GSK3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lnp1A0A1B0GSK3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Lnp1A0A1B0GSK3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.32■□□□□ 0.84
Lnp1A0A1B0GSK3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lnp1A0A1B0GSK3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lnp1A0A1B0GSK3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lnp1A0A1B0GSK3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lnp1A0A1B0GSK3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lnp1A0A1B0GSK3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.28■□□□□ 0.84
Lnp1A0A1B0GSK3 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.28■□□□□ 0.84
Lnp1A0A1B0GSK3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lnp1A0A1B0GSK3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 Gm9397-201ENSMUST00000200125 605 ntBASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.27■□□□□ 0.84
Lnp1A0A1B0GSK3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Lnp1A0A1B0GSK3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lnp1A0A1B0GSK3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lnp1A0A1B0GSK3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lnp1A0A1B0GSK3 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.23■□□□□ 0.83
Lnp1A0A1B0GSK3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lnp1A0A1B0GSK3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lnp1A0A1B0GSK3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.23■□□□□ 0.83
Lnp1A0A1B0GSK3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lnp1A0A1B0GSK3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lnp1A0A1B0GSK3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lnp1A0A1B0GSK3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.22■□□□□ 0.83
Lnp1A0A1B0GSK3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lnp1A0A1B0GSK3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lnp1A0A1B0GSK3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lnp1A0A1B0GSK3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms