Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21-psA0A140T8R2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21-psA0A140T8R2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.63■□□□□ 0.73
Vma21-psA0A140T8R2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21-psA0A140T8R2 Amer2-203ENSMUST00000225247 2662 ntBASIC19.62■□□□□ 0.73
Vma21-psA0A140T8R2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21-psA0A140T8R2 Gm24804-201ENSMUST00000174982 85 ntBASIC19.62■□□□□ 0.73
Vma21-psA0A140T8R2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21-psA0A140T8R2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21-psA0A140T8R2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21-psA0A140T8R2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vma21-psA0A140T8R2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.59■□□□□ 0.73
Vma21-psA0A140T8R2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vma21-psA0A140T8R2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vma21-psA0A140T8R2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Vma21-psA0A140T8R2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vma21-psA0A140T8R2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vma21-psA0A140T8R2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Vma21-psA0A140T8R2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Vma21-psA0A140T8R2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vma21-psA0A140T8R2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Vma21-psA0A140T8R2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vma21-psA0A140T8R2 Gm16148-201ENSMUST00000119653 893 ntBASIC19.53■□□□□ 0.72
Vma21-psA0A140T8R2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21-psA0A140T8R2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21-psA0A140T8R2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Vma21-psA0A140T8R2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vma21-psA0A140T8R2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21-psA0A140T8R2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21-psA0A140T8R2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21-psA0A140T8R2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21-psA0A140T8R2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vma21-psA0A140T8R2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vma21-psA0A140T8R2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vma21-psA0A140T8R2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vma21-psA0A140T8R2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vma21-psA0A140T8R2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vma21-psA0A140T8R2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vma21-psA0A140T8R2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vma21-psA0A140T8R2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vma21-psA0A140T8R2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Vma21-psA0A140T8R2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vma21-psA0A140T8R2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vma21-psA0A140T8R2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vma21-psA0A140T8R2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vma21-psA0A140T8R2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.45■□□□□ 0.7
Vma21-psA0A140T8R2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vma21-psA0A140T8R2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vma21-psA0A140T8R2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.45■□□□□ 0.7
Vma21-psA0A140T8R2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vma21-psA0A140T8R2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vma21-psA0A140T8R2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21-psA0A140T8R2 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.44■□□□□ 0.7
Vma21-psA0A140T8R2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21-psA0A140T8R2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21-psA0A140T8R2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21-psA0A140T8R2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21-psA0A140T8R2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21-psA0A140T8R2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vma21-psA0A140T8R2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vma21-psA0A140T8R2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.4■□□□□ 0.7
Vma21-psA0A140T8R2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vma21-psA0A140T8R2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vma21-psA0A140T8R2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vma21-psA0A140T8R2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Vma21-psA0A140T8R2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vma21-psA0A140T8R2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vma21-psA0A140T8R2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vma21-psA0A140T8R2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.38■□□□□ 0.69
Vma21-psA0A140T8R2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.37■□□□□ 0.69
Vma21-psA0A140T8R2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vma21-psA0A140T8R2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vma21-psA0A140T8R2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vma21-psA0A140T8R2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21-psA0A140T8R2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21-psA0A140T8R2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.36■□□□□ 0.69
Vma21-psA0A140T8R2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21-psA0A140T8R2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.36■□□□□ 0.69
Vma21-psA0A140T8R2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21-psA0A140T8R2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vma21-psA0A140T8R2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.35■□□□□ 0.69
Vma21-psA0A140T8R2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.35■□□□□ 0.69
Vma21-psA0A140T8R2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vma21-psA0A140T8R2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Vma21-psA0A140T8R2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vma21-psA0A140T8R2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vma21-psA0A140T8R2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vma21-psA0A140T8R2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vma21-psA0A140T8R2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vma21-psA0A140T8R2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vma21-psA0A140T8R2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vma21-psA0A140T8R2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vma21-psA0A140T8R2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vma21-psA0A140T8R2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vma21-psA0A140T8R2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vma21-psA0A140T8R2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vma21-psA0A140T8R2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vma21-psA0A140T8R2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vma21-psA0A140T8R2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vma21-psA0A140T8R2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms