Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv1-88A0A140T8N1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.14■□□□□ 0.17
Igkv1-88A0A140T8N1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv1-88A0A140T8N1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Igkv1-88A0A140T8N1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv1-88A0A140T8N1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.13■□□□□ 0.17
Igkv1-88A0A140T8N1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.12■□□□□ 0.17
Igkv1-88A0A140T8N1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv1-88A0A140T8N1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv1-88A0A140T8N1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv1-88A0A140T8N1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Igkv1-88A0A140T8N1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv1-88A0A140T8N1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv1-88A0A140T8N1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv1-88A0A140T8N1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Igkv1-88A0A140T8N1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv1-88A0A140T8N1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv1-88A0A140T8N1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv1-88A0A140T8N1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv1-88A0A140T8N1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.1■□□□□ 0.17
Igkv1-88A0A140T8N1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Igkv1-88A0A140T8N1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv1-88A0A140T8N1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv1-88A0A140T8N1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Igkv1-88A0A140T8N1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
Igkv1-88A0A140T8N1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv1-88A0A140T8N1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv1-88A0A140T8N1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-88A0A140T8N1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-88A0A140T8N1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-88A0A140T8N1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-88A0A140T8N1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-88A0A140T8N1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-88A0A140T8N1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv1-88A0A140T8N1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Igkv1-88A0A140T8N1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Igkv1-88A0A140T8N1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.05■□□□□ 0.16
Igkv1-88A0A140T8N1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv1-88A0A140T8N1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv1-88A0A140T8N1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.03■□□□□ 0.16
Igkv1-88A0A140T8N1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv1-88A0A140T8N1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv1-88A0A140T8N1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv1-88A0A140T8N1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv1-88A0A140T8N1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.01■□□□□ 0.15
Igkv1-88A0A140T8N1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv1-88A0A140T8N1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igkv1-88A0A140T8N1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16■□□□□ 0.15
Igkv1-88A0A140T8N1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-88A0A140T8N1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-88A0A140T8N1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-88A0A140T8N1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-88A0A140T8N1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Igkv1-88A0A140T8N1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv1-88A0A140T8N1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.98■□□□□ 0.15
Igkv1-88A0A140T8N1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv1-88A0A140T8N1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC15.97■□□□□ 0.15
Igkv1-88A0A140T8N1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv1-88A0A140T8N1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv1-88A0A140T8N1 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.97■□□□□ 0.15
Igkv1-88A0A140T8N1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv1-88A0A140T8N1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv1-88A0A140T8N1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-88A0A140T8N1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-88A0A140T8N1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
Igkv1-88A0A140T8N1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Igkv1-88A0A140T8N1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-88A0A140T8N1 Fezf2-202ENSMUST00000224023 1917 ntBASIC15.95■□□□□ 0.14
Igkv1-88A0A140T8N1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-88A0A140T8N1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-88A0A140T8N1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-88A0A140T8N1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-88A0A140T8N1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-88A0A140T8N1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.94■□□□□ 0.14
Igkv1-88A0A140T8N1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.93■□□□□ 0.14
Igkv1-88A0A140T8N1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Igkv1-88A0A140T8N1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv1-88A0A140T8N1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv1-88A0A140T8N1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-88A0A140T8N1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-88A0A140T8N1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-88A0A140T8N1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Igkv1-88A0A140T8N1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-88A0A140T8N1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Igkv1-88A0A140T8N1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv1-88A0A140T8N1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms