Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Gm16148-201ENSMUST00000119653 893 ntBASIC20.39■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.38■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Peli2-204ENSMUST00000226513 1320 ntBASIC20.38■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.35■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.34■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rpl23a-ps3A0A140T8M7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rpl23a-ps3A0A140T8M7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.25■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.23■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.22■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.22■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.21■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl23a-ps3A0A140T8M7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.15■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl23a-ps3A0A140T8M7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.12■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.12■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl23a-ps3A0A140T8M7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms