Protein–RNA interactions for Protein: A0A0N4SV92

Duxf3, Double homeobox family member 3, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Duxf3A0A0N4SV92 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Duxf3A0A0N4SV92 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Duxf3A0A0N4SV92 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Duxf3A0A0N4SV92 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Duxf3A0A0N4SV92 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Duxf3A0A0N4SV92 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Duxf3A0A0N4SV92 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.29■■■□□ 2.6
Duxf3A0A0N4SV92 Gm16148-201ENSMUST00000119653 893 ntBASIC31.28■■■□□ 2.6
Duxf3A0A0N4SV92 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Duxf3A0A0N4SV92 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.26■■■□□ 2.59
Duxf3A0A0N4SV92 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Duxf3A0A0N4SV92 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.25■■■□□ 2.59
Duxf3A0A0N4SV92 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Duxf3A0A0N4SV92 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Duxf3A0A0N4SV92 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Duxf3A0A0N4SV92 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Duxf3A0A0N4SV92 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Duxf3A0A0N4SV92 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Duxf3A0A0N4SV92 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.22■■■□□ 2.59
Duxf3A0A0N4SV92 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Duxf3A0A0N4SV92 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Duxf3A0A0N4SV92 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Duxf3A0A0N4SV92 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.21■■■□□ 2.59
Duxf3A0A0N4SV92 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Duxf3A0A0N4SV92 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Duxf3A0A0N4SV92 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.18■■■□□ 2.58
Duxf3A0A0N4SV92 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Duxf3A0A0N4SV92 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Duxf3A0A0N4SV92 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Duxf3A0A0N4SV92 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Duxf3A0A0N4SV92 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Duxf3A0A0N4SV92 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Duxf3A0A0N4SV92 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Duxf3A0A0N4SV92 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Duxf3A0A0N4SV92 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Duxf3A0A0N4SV92 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Duxf3A0A0N4SV92 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Duxf3A0A0N4SV92 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.1■■■□□ 2.57
Duxf3A0A0N4SV92 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.09■■■□□ 2.57
Duxf3A0A0N4SV92 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Duxf3A0A0N4SV92 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Duxf3A0A0N4SV92 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Duxf3A0A0N4SV92 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Duxf3A0A0N4SV92 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Duxf3A0A0N4SV92 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Duxf3A0A0N4SV92 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Duxf3A0A0N4SV92 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Duxf3A0A0N4SV92 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Duxf3A0A0N4SV92 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Duxf3A0A0N4SV92 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Duxf3A0A0N4SV92 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Duxf3A0A0N4SV92 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Duxf3A0A0N4SV92 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Duxf3A0A0N4SV92 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Duxf3A0A0N4SV92 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
Duxf3A0A0N4SV92 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Duxf3A0A0N4SV92 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31■■■□□ 2.55
Duxf3A0A0N4SV92 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Duxf3A0A0N4SV92 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31■■■□□ 2.55
Duxf3A0A0N4SV92 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Duxf3A0A0N4SV92 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.99■■■□□ 2.55
Duxf3A0A0N4SV92 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.98■■■□□ 2.55
Duxf3A0A0N4SV92 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Duxf3A0A0N4SV92 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Duxf3A0A0N4SV92 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.94■■■□□ 2.54
Duxf3A0A0N4SV92 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Duxf3A0A0N4SV92 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Duxf3A0A0N4SV92 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Duxf3A0A0N4SV92 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Duxf3A0A0N4SV92 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Duxf3A0A0N4SV92 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Duxf3A0A0N4SV92 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Duxf3A0A0N4SV92 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Duxf3A0A0N4SV92 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Duxf3A0A0N4SV92 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Duxf3A0A0N4SV92 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Duxf3A0A0N4SV92 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Duxf3A0A0N4SV92 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Duxf3A0A0N4SV92 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Duxf3A0A0N4SV92 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Duxf3A0A0N4SV92 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Duxf3A0A0N4SV92 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Duxf3A0A0N4SV92 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Duxf3A0A0N4SV92 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.84■■■□□ 2.53
Duxf3A0A0N4SV92 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
Duxf3A0A0N4SV92 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Duxf3A0A0N4SV92 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Duxf3A0A0N4SV92 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Duxf3A0A0N4SV92 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Duxf3A0A0N4SV92 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Duxf3A0A0N4SV92 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.81■■■□□ 2.52
Duxf3A0A0N4SV92 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Duxf3A0A0N4SV92 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Duxf3A0A0N4SV92 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Duxf3A0A0N4SV92 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Duxf3A0A0N4SV92 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.72■■■□□ 2.51
Duxf3A0A0N4SV92 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Duxf3A0A0N4SV92 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Duxf3A0A0N4SV92 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Duxf3A0A0N4SV92 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.71■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms