Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.79■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.78■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.75■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.75■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.69■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm24804-201ENSMUST00000174982 85 ntBASIC21.69■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.67■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16148-201ENSMUST00000119653 893 ntBASIC21.56■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.51■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.51■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.47■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms