Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-1A0A0G2JEV5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-1A0A0G2JEV5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-1A0A0G2JEV5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-1A0A0G2JEV5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-1A0A0G2JEV5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav7-1A0A0G2JEV5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav7-1A0A0G2JEV5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav7-1A0A0G2JEV5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav7-1A0A0G2JEV5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav7-1A0A0G2JEV5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav7-1A0A0G2JEV5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.96■□□□□ 0.63
Trav7-1A0A0G2JEV5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-1A0A0G2JEV5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-1A0A0G2JEV5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-1A0A0G2JEV5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav7-1A0A0G2JEV5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav7-1A0A0G2JEV5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trav7-1A0A0G2JEV5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav7-1A0A0G2JEV5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav7-1A0A0G2JEV5 Gm8109-201ENSMUST00000194076 746 ntBASIC18.93■□□□□ 0.62
Trav7-1A0A0G2JEV5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav7-1A0A0G2JEV5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trav7-1A0A0G2JEV5 Gm26115-201ENSMUST00000175605 87 ntBASIC18.91■□□□□ 0.62
Trav7-1A0A0G2JEV5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav7-1A0A0G2JEV5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7-1A0A0G2JEV5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.89■□□□□ 0.62
Trav7-1A0A0G2JEV5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-1A0A0G2JEV5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-1A0A0G2JEV5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.88■□□□□ 0.61
Trav7-1A0A0G2JEV5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-1A0A0G2JEV5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trav7-1A0A0G2JEV5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-1A0A0G2JEV5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-1A0A0G2JEV5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trav7-1A0A0G2JEV5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-1A0A0G2JEV5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav7-1A0A0G2JEV5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-1A0A0G2JEV5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.85■□□□□ 0.61
Trav7-1A0A0G2JEV5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7-1A0A0G2JEV5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7-1A0A0G2JEV5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trav7-1A0A0G2JEV5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav7-1A0A0G2JEV5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7-1A0A0G2JEV5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trav7-1A0A0G2JEV5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Trav7-1A0A0G2JEV5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-1A0A0G2JEV5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-1A0A0G2JEV5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Trav7-1A0A0G2JEV5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-1A0A0G2JEV5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-1A0A0G2JEV5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-1A0A0G2JEV5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav7-1A0A0G2JEV5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7-1A0A0G2JEV5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7-1A0A0G2JEV5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7-1A0A0G2JEV5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7-1A0A0G2JEV5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trav7-1A0A0G2JEV5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav7-1A0A0G2JEV5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav7-1A0A0G2JEV5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7-1A0A0G2JEV5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7-1A0A0G2JEV5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7-1A0A0G2JEV5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7-1A0A0G2JEV5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7-1A0A0G2JEV5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7-1A0A0G2JEV5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7-1A0A0G2JEV5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7-1A0A0G2JEV5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7-1A0A0G2JEV5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7-1A0A0G2JEV5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7-1A0A0G2JEV5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.72■□□□□ 0.59
Trav7-1A0A0G2JEV5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.72■□□□□ 0.59
Trav7-1A0A0G2JEV5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav7-1A0A0G2JEV5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trav7-1A0A0G2JEV5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7-1A0A0G2JEV5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7-1A0A0G2JEV5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7-1A0A0G2JEV5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.69■□□□□ 0.58
Trav7-1A0A0G2JEV5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7-1A0A0G2JEV5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav7-1A0A0G2JEV5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7-1A0A0G2JEV5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7-1A0A0G2JEV5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7-1A0A0G2JEV5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7-1A0A0G2JEV5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7-1A0A0G2JEV5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7-1A0A0G2JEV5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7-1A0A0G2JEV5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trav7-1A0A0G2JEV5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trav7-1A0A0G2JEV5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-1A0A0G2JEV5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-1A0A0G2JEV5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7-1A0A0G2JEV5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7-1A0A0G2JEV5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav7-1A0A0G2JEV5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav7-1A0A0G2JEV5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7-1A0A0G2JEV5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Trav7-1A0A0G2JEV5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7-1A0A0G2JEV5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms