Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv16A0A0B4J1H3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv16A0A0B4J1H3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv16A0A0B4J1H3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv16A0A0B4J1H3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv16A0A0B4J1H3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv16A0A0B4J1H3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv16A0A0B4J1H3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv16A0A0B4J1H3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trbv16A0A0B4J1H3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv16A0A0B4J1H3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.88■□□□□ 0.45
Trbv16A0A0B4J1H3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv16A0A0B4J1H3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv16A0A0B4J1H3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv16A0A0B4J1H3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv16A0A0B4J1H3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv16A0A0B4J1H3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv16A0A0B4J1H3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.85■□□□□ 0.45
Trbv16A0A0B4J1H3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.85■□□□□ 0.45
Trbv16A0A0B4J1H3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv16A0A0B4J1H3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv16A0A0B4J1H3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv16A0A0B4J1H3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv16A0A0B4J1H3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trbv16A0A0B4J1H3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv16A0A0B4J1H3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv16A0A0B4J1H3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv16A0A0B4J1H3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trbv16A0A0B4J1H3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv16A0A0B4J1H3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv16A0A0B4J1H3 Gm26115-201ENSMUST00000175605 87 ntBASIC17.79■□□□□ 0.44
Trbv16A0A0B4J1H3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trbv16A0A0B4J1H3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv16A0A0B4J1H3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv16A0A0B4J1H3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv16A0A0B4J1H3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv16A0A0B4J1H3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv16A0A0B4J1H3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv16A0A0B4J1H3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Trbv16A0A0B4J1H3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv16A0A0B4J1H3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv16A0A0B4J1H3 Gm8109-201ENSMUST00000194076 746 ntBASIC17.75■□□□□ 0.43
Trbv16A0A0B4J1H3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv16A0A0B4J1H3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv16A0A0B4J1H3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv16A0A0B4J1H3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv16A0A0B4J1H3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv16A0A0B4J1H3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv16A0A0B4J1H3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv16A0A0B4J1H3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv16A0A0B4J1H3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv16A0A0B4J1H3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv16A0A0B4J1H3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.69■□□□□ 0.42
Trbv16A0A0B4J1H3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv16A0A0B4J1H3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trbv16A0A0B4J1H3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv16A0A0B4J1H3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbv16A0A0B4J1H3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv16A0A0B4J1H3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv16A0A0B4J1H3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbv16A0A0B4J1H3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv16A0A0B4J1H3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv16A0A0B4J1H3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trbv16A0A0B4J1H3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv16A0A0B4J1H3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv16A0A0B4J1H3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv16A0A0B4J1H3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trbv16A0A0B4J1H3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv16A0A0B4J1H3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv16A0A0B4J1H3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv16A0A0B4J1H3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv16A0A0B4J1H3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv16A0A0B4J1H3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv16A0A0B4J1H3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv16A0A0B4J1H3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv16A0A0B4J1H3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv16A0A0B4J1H3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trbv16A0A0B4J1H3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv16A0A0B4J1H3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv16A0A0B4J1H3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv16A0A0B4J1H3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv16A0A0B4J1H3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv16A0A0B4J1H3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.61■□□□□ 0.41
Trbv16A0A0B4J1H3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv16A0A0B4J1H3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv16A0A0B4J1H3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv16A0A0B4J1H3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv16A0A0B4J1H3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.6■□□□□ 0.41
Trbv16A0A0B4J1H3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv16A0A0B4J1H3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trbv16A0A0B4J1H3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv16A0A0B4J1H3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv16A0A0B4J1H3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbv16A0A0B4J1H3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv16A0A0B4J1H3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv16A0A0B4J1H3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv16A0A0B4J1H3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv16A0A0B4J1H3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv16A0A0B4J1H3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trbv16A0A0B4J1H3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms