Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-47A0A0A6YY41 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-47A0A0A6YY41 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-47A0A0A6YY41 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ighv1-47A0A0A6YY41 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-47A0A0A6YY41 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-47A0A0A6YY41 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.35■□□□□ 0.85
Ighv1-47A0A0A6YY41 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-47A0A0A6YY41 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-47A0A0A6YY41 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-47A0A0A6YY41 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.35■□□□□ 0.85
Ighv1-47A0A0A6YY41 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ighv1-47A0A0A6YY41 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ighv1-47A0A0A6YY41 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ighv1-47A0A0A6YY41 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-47A0A0A6YY41 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ighv1-47A0A0A6YY41 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.33■□□□□ 0.84
Ighv1-47A0A0A6YY41 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ighv1-47A0A0A6YY41 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ighv1-47A0A0A6YY41 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.32■□□□□ 0.84
Ighv1-47A0A0A6YY41 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-47A0A0A6YY41 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ighv1-47A0A0A6YY41 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-47A0A0A6YY41 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv1-47A0A0A6YY41 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-47A0A0A6YY41 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-47A0A0A6YY41 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-47A0A0A6YY41 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-47A0A0A6YY41 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-47A0A0A6YY41 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-47A0A0A6YY41 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-47A0A0A6YY41 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ighv1-47A0A0A6YY41 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ighv1-47A0A0A6YY41 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-47A0A0A6YY41 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Ighv1-47A0A0A6YY41 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ighv1-47A0A0A6YY41 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv1-47A0A0A6YY41 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-47A0A0A6YY41 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-47A0A0A6YY41 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-47A0A0A6YY41 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.21■□□□□ 0.83
Ighv1-47A0A0A6YY41 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv1-47A0A0A6YY41 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ighv1-47A0A0A6YY41 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.21■□□□□ 0.83
Ighv1-47A0A0A6YY41 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv1-47A0A0A6YY41 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-47A0A0A6YY41 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-47A0A0A6YY41 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-47A0A0A6YY41 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-47A0A0A6YY41 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-47A0A0A6YY41 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
Ighv1-47A0A0A6YY41 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ighv1-47A0A0A6YY41 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-47A0A0A6YY41 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-47A0A0A6YY41 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv1-47A0A0A6YY41 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.17■□□□□ 0.82
Ighv1-47A0A0A6YY41 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv1-47A0A0A6YY41 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-47A0A0A6YY41 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-47A0A0A6YY41 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-47A0A0A6YY41 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Ighv1-47A0A0A6YY41 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-47A0A0A6YY41 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-47A0A0A6YY41 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Ighv1-47A0A0A6YY41 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-47A0A0A6YY41 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-47A0A0A6YY41 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv1-47A0A0A6YY41 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv1-47A0A0A6YY41 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv1-47A0A0A6YY41 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-47A0A0A6YY41 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-47A0A0A6YY41 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-47A0A0A6YY41 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-47A0A0A6YY41 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-47A0A0A6YY41 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-47A0A0A6YY41 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ighv1-47A0A0A6YY41 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ighv1-47A0A0A6YY41 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-47A0A0A6YY41 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv1-47A0A0A6YY41 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ighv1-47A0A0A6YY41 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.08■□□□□ 0.81
Ighv1-47A0A0A6YY41 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ighv1-47A0A0A6YY41 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ighv1-47A0A0A6YY41 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-47A0A0A6YY41 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-47A0A0A6YY41 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-47A0A0A6YY41 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-47A0A0A6YY41 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv1-47A0A0A6YY41 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv1-47A0A0A6YY41 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ighv1-47A0A0A6YY41 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-47A0A0A6YY41 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-47A0A0A6YY41 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-47A0A0A6YY41 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-47A0A0A6YY41 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.02■□□□□ 0.8
Ighv1-47A0A0A6YY41 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-47A0A0A6YY41 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ighv1-47A0A0A6YY41 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-47A0A0A6YY41 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-47A0A0A6YY41 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms