Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.29■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-23A0A0A6YVW3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-23A0A0A6YVW3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-23A0A0A6YVW3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.25■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-23A0A0A6YVW3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.21■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-23A0A0A6YVW3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.19■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.17■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.16■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Ighv1-23A0A0A6YVW3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-23A0A0A6YVW3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ighv1-23A0A0A6YVW3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.09■□□□□ 0.49
Ighv1-23A0A0A6YVW3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.08■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-23A0A0A6YVW3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Peli2-204ENSMUST00000226513 1320 ntBASIC18.06■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-23A0A0A6YVW3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.05■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Gm24804-201ENSMUST00000174982 85 ntBASIC18.02■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-23A0A0A6YVW3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Ighv1-23A0A0A6YVW3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-23A0A0A6YVW3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms