Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav18A0A075B656 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav18A0A075B656 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav18A0A075B656 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.23■□□□□ 0.83
Trav18A0A075B656 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav18A0A075B656 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav18A0A075B656 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav18A0A075B656 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav18A0A075B656 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav18A0A075B656 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav18A0A075B656 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav18A0A075B656 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.18■□□□□ 0.82
Trav18A0A075B656 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav18A0A075B656 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav18A0A075B656 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.17■□□□□ 0.82
Trav18A0A075B656 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Trav18A0A075B656 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav18A0A075B656 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav18A0A075B656 Gm24804-201ENSMUST00000174982 85 ntBASIC20.15■□□□□ 0.82
Trav18A0A075B656 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav18A0A075B656 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav18A0A075B656 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav18A0A075B656 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.13■□□□□ 0.81
Trav18A0A075B656 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trav18A0A075B656 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav18A0A075B656 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trav18A0A075B656 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav18A0A075B656 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.1■□□□□ 0.81
Trav18A0A075B656 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav18A0A075B656 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trav18A0A075B656 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav18A0A075B656 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trav18A0A075B656 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trav18A0A075B656 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav18A0A075B656 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav18A0A075B656 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav18A0A075B656 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav18A0A075B656 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav18A0A075B656 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trav18A0A075B656 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trav18A0A075B656 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.03■□□□□ 0.8
Trav18A0A075B656 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav18A0A075B656 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trav18A0A075B656 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav18A0A075B656 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav18A0A075B656 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav18A0A075B656 Gm16148-201ENSMUST00000119653 893 ntBASIC20■□□□□ 0.79
Trav18A0A075B656 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav18A0A075B656 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav18A0A075B656 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav18A0A075B656 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.98■□□□□ 0.79
Trav18A0A075B656 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav18A0A075B656 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav18A0A075B656 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav18A0A075B656 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav18A0A075B656 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav18A0A075B656 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav18A0A075B656 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav18A0A075B656 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav18A0A075B656 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav18A0A075B656 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav18A0A075B656 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav18A0A075B656 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav18A0A075B656 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trav18A0A075B656 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trav18A0A075B656 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav18A0A075B656 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav18A0A075B656 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav18A0A075B656 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav18A0A075B656 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trav18A0A075B656 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav18A0A075B656 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms