Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-1A0A075B5Z8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6-1A0A075B5Z8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6-1A0A075B5Z8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.92■□□□□ 0.78
Trav6-1A0A075B5Z8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav6-1A0A075B5Z8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.91■□□□□ 0.78
Trav6-1A0A075B5Z8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.91■□□□□ 0.78
Trav6-1A0A075B5Z8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-1A0A075B5Z8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-1A0A075B5Z8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav6-1A0A075B5Z8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.89■□□□□ 0.77
Trav6-1A0A075B5Z8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav6-1A0A075B5Z8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-1A0A075B5Z8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-1A0A075B5Z8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-1A0A075B5Z8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-1A0A075B5Z8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trav6-1A0A075B5Z8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-1A0A075B5Z8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trav6-1A0A075B5Z8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trav6-1A0A075B5Z8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trav6-1A0A075B5Z8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-1A0A075B5Z8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-1A0A075B5Z8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-1A0A075B5Z8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-1A0A075B5Z8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-1A0A075B5Z8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-1A0A075B5Z8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-1A0A075B5Z8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-1A0A075B5Z8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-1A0A075B5Z8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-1A0A075B5Z8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Trav6-1A0A075B5Z8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.81■□□□□ 0.76
Trav6-1A0A075B5Z8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav6-1A0A075B5Z8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-1A0A075B5Z8 Peli2-204ENSMUST00000226513 1320 ntBASIC19.8■□□□□ 0.76
Trav6-1A0A075B5Z8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-1A0A075B5Z8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-1A0A075B5Z8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-1A0A075B5Z8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-1A0A075B5Z8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-1A0A075B5Z8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-1A0A075B5Z8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-1A0A075B5Z8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-1A0A075B5Z8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-1A0A075B5Z8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-1A0A075B5Z8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-1A0A075B5Z8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-1A0A075B5Z8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav6-1A0A075B5Z8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Trav6-1A0A075B5Z8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trav6-1A0A075B5Z8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-1A0A075B5Z8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trav6-1A0A075B5Z8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-1A0A075B5Z8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.72■□□□□ 0.75
Trav6-1A0A075B5Z8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-1A0A075B5Z8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-1A0A075B5Z8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-1A0A075B5Z8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trav6-1A0A075B5Z8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav6-1A0A075B5Z8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6-1A0A075B5Z8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Trav6-1A0A075B5Z8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-1A0A075B5Z8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-1A0A075B5Z8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-1A0A075B5Z8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.67■□□□□ 0.74
Trav6-1A0A075B5Z8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-1A0A075B5Z8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-1A0A075B5Z8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-1A0A075B5Z8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-1A0A075B5Z8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-1A0A075B5Z8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Trav6-1A0A075B5Z8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-1A0A075B5Z8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-1A0A075B5Z8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-1A0A075B5Z8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-1A0A075B5Z8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-1A0A075B5Z8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Trav6-1A0A075B5Z8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trav6-1A0A075B5Z8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
Trav6-1A0A075B5Z8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-1A0A075B5Z8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-1A0A075B5Z8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trav6-1A0A075B5Z8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trav6-1A0A075B5Z8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav6-1A0A075B5Z8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6-1A0A075B5Z8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Trav6-1A0A075B5Z8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-1A0A075B5Z8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-1A0A075B5Z8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-1A0A075B5Z8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav6-1A0A075B5Z8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-1A0A075B5Z8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-1A0A075B5Z8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-1A0A075B5Z8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.55■□□□□ 0.72
Trav6-1A0A075B5Z8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav6-1A0A075B5Z8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-1A0A075B5Z8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-1A0A075B5Z8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-1A0A075B5Z8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms