Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smg8Q8VE18 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Smg8Q8VE18 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smg8Q8VE18 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.72■□□□□ 0.75
Smg8Q8VE18 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.71■□□□□ 0.75
Smg8Q8VE18 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Gm11927-201ENSMUST00000118472 759 ntBASIC19.71■□□□□ 0.75
Smg8Q8VE18 Gm22325-201ENSMUST00000158904 308 ntBASIC19.71■□□□□ 0.75
Smg8Q8VE18 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Gm18666-201ENSMUST00000190039 958 ntBASIC19.71■□□□□ 0.75
Smg8Q8VE18 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smg8Q8VE18 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Flg-201ENSMUST00000050758 1488 ntBASIC19.7■□□□□ 0.74
Smg8Q8VE18 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.7■□□□□ 0.74
Smg8Q8VE18 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Smg8Q8VE18 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smg8Q8VE18 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Gm13158-201ENSMUST00000122007 736 ntBASIC19.68■□□□□ 0.74
Smg8Q8VE18 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smg8Q8VE18 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smg8Q8VE18 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smg8Q8VE18 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Smg8Q8VE18 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg8Q8VE18 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.66■□□□□ 0.74
Smg8Q8VE18 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Smg8Q8VE18 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.66■□□□□ 0.74
Smg8Q8VE18 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg8Q8VE18 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smg8Q8VE18 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.65■□□□□ 0.74
Smg8Q8VE18 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smg8Q8VE18 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms