Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf4Q8K4J2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ebf4Q8K4J2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf4Q8K4J2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf4Q8K4J2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf4Q8K4J2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ebf4Q8K4J2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf4Q8K4J2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf4Q8K4J2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf4Q8K4J2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.77■□□□□ 0.28
Ebf4Q8K4J2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ebf4Q8K4J2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf4Q8K4J2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ebf4Q8K4J2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf4Q8K4J2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms