Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp6nlQ80XC3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.43■□□□□ 0.86
Usp6nlQ80XC3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Mtag2-201ENSMUST00000058665 714 ntBASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp6nlQ80XC3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Gm9987-201ENSMUST00000069768 567 ntBASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Zfp783-201ENSMUST00000095946 670 ntBASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.41■□□□□ 0.86
Usp6nlQ80XC3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp6nlQ80XC3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.39■□□□□ 0.86
Usp6nlQ80XC3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp6nlQ80XC3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp6nlQ80XC3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp6nlQ80XC3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Golph3-202ENSMUST00000226517 2359 ntBASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp6nlQ80XC3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms