Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC23.96■■□□□ 1.43
Uspl1Q3ULM6 Gm4968-201ENSMUST00000071458 858 ntBASIC23.96■■□□□ 1.43
Uspl1Q3ULM6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Uspl1Q3ULM6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Uspl1Q3ULM6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.95■■□□□ 1.43
Uspl1Q3ULM6 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 Rab3c-203ENSMUST00000224180 967 ntBASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Uspl1Q3ULM6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Uspl1Q3ULM6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
Uspl1Q3ULM6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Uspl1Q3ULM6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.94■■□□□ 1.42
Uspl1Q3ULM6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Uspl1Q3ULM6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Uspl1Q3ULM6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Uspl1Q3ULM6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Dmtn-210ENSMUST00000228824 2377 ntBASIC23.93■■□□□ 1.42
Uspl1Q3ULM6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Uspl1Q3ULM6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Gm29257-201ENSMUST00000186115 639 ntBASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Uspl1Q3ULM6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Uspl1Q3ULM6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Uspl1Q3ULM6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
Uspl1Q3ULM6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Uspl1Q3ULM6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Uspl1Q3ULM6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Gm44549-201ENSMUST00000208351 577 ntBASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Uspl1Q3ULM6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Uspl1Q3ULM6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Uspl1Q3ULM6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Uspl1Q3ULM6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC23.88■■□□□ 1.41
Uspl1Q3ULM6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Uspl1Q3ULM6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Uspl1Q3ULM6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Uspl1Q3ULM6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 186.2 ms